Carroll R R - OmicsDI

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Unknown (1721)
Transcriptomics (89)
Proteomics (43)
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Organisms

Homo sapiens (105)
Mus musculus (28)
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Saccharomyces cerevisiae (3)
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Zymomonas mobilis (1)
Oryza sativa (1)
Mycobacterium tuberculosis (1)
Staphylococcus aureus (1)
Caenorhabditis elegans (1)
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Danio rerio (1)
Arabidopsis thaliana (1)
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Repository

biostudies-arrayexpress (108)
pride (36)
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Disease

Acute myeloid leukemia (8)
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High risk B-precurser acute lymphoblastic leukemia (1)
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Not Available (1)
Acute leukemia (1)
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Mass Spectrometry (36)
Affinity purification coupled with mass spectrometry proteomics (19)
Shotgun proteomics (13)
Mass spectrometry (5)
Bottom-up proteomics (4)
Chemical cross-linking coupled with mass spectrometry proteomics (4)
Gel-based experiment (2)
Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
Top-down proteomics (1)

Instrument Platform

Illumina Genome Analyzer IIx (3)
Q Exactive (3)
Illumina HiSeq 2000 (2)
LTQ Orbitrap Elite (2)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (2)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (2)
Liquid Chromatography MS - positive - reverse phase (2)
Liquid Chromatography Tandem MS (LC-MS/MS) (2)
FS450 (1)
GCS3000 (1)
418 [Affymetrix] (1)
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Illumina HiSeq 2500 (1)
Instrument (1)
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Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - hilic (1)
Nuclear Magnetic Resonance (NMR) (1)
LTQ-Orbitrap (1)

Publication Date

2010 (22)
2014 (16)
2013 (13)
2012 (13)
2011 (13)
2015 (10)
2019 (7)
2020 (6)
2023 (6)
2008 (5)
2025 (5)
2022 (5)
2021 (5)
2017 (4)
2016 (4)
2009 (4)
2024 (4)
2018 (3)
2006 (3)
2026 (3)
2007 (2)
2005 (2)

CHEBI ID

CHEBI:30769 (5)
CHEBI:16704 (4)
CHEBI:17750 (4)
CHEBI:15354 (3)
CHEBI:15428 (3)
CHEBI:15676 (3)
CHEBI:15741 (3)
CHEBI:15999 (3)
CHEBI:16113 (3)
CHEBI:16566 (3)
CHEBI:16927 (3)
CHEBI:16958 (3)
CHEBI:17012 (3)
CHEBI:17151 (3)
CHEBI:17234 (3)
CHEBI:17268 (3)
CHEBI:17306 (3)
CHEBI:17568 (3)
CHEBI:17724 (3)
CHEBI:17748 (3)
CHEBI:17802 (3)
CHEBI:17992 (3)
CHEBI:18012 (3)
CHEBI:18300 (3)
CHEBI:27389 (3)
CHEBI:27480 (3)
CHEBI:30754 (3)
CHEBI:30887 (3)
CHEBI:32389 (3)
CHEBI:32816 (3)

Metabolite Name

16(R)-HETE (2)
19(S)-HETE (2)
2'-O-Methylodoratol (2)
3-Hydroxyphenylacetate (2)
4-Hydroxyphenylacetate (2)
5-HETE (2)
Allantoin (2)
Beta-alanine (2)
Betaine (2)
Butrin (2)
Citrate (2)
D-Fructose (2)
D-Galactose (2)
D-Glucose (2)
D-Mannose (2)
Eriocitrin (2)
Genistin (2)
Glucose (2)
Gynocardin (2)
Isobutrin (2)
Isovitexin (2)
L-Phenylalanine (2)
Neoeriocitrin (2)
Pregnenolone acetate (2)
Pyruvate (2)
Quercetin (2)
Sorgolactone (2)
Theobromine (2)
Uracil (2)
Vitexin (2)

Modification

10.008269 (1)
15.994915 (1)
2x(15)N labeled L-lysine (1)
42.010565 (1)
4x(15)N labeled L-arginine (1)
57.021464 (1)
8.014199 (1)

Study type

Transcription profiling by array (67)
ChIP-seq (17)
ChIP-chip by tiling array (8)
MicroRNA profiling by array (5)
Unknown experiment type (3)
Methylation profiling by array (2)
RNA-seq of coding RNA (2)
ChIP-chip by array (1)
Genotyping by array (1)
Proteomic profiling by array (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2021 (190)
2022 (179)
2023 (164)
2024 (156)
2025 (148)
2019 (132)
2018 (121)
2020 (107)
2017 (93)
2016 (91)
2015 (77)
2014 (74)
2013 (65)
2012 (59)
2010 (46)
2011 (36)
2026 (29)
2008 (20)
2009 (18)
2006 (8)
2007 (6)
2005 (4)
2004 (3)
2002 (2)
2003 (1)

Lab affiliation

MRC Protein Phosphorylation and Ubiquitylation Unit, School of Life Sciences, University of Dundee, Dundee, UK (4)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute of Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands (2)
Senior Group Leader (2)
The Institute of Cancer Research (2)
Aarhus University (1)
Breast Cancer Now The Institute of Cancer Research (1)
Cambridge Stem Cell Institute, Jeffrey Cheah Biomedical Centre, University of Cambridge, Cambridge, UK (1)
Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver V5Z 1L3, Canada (1)
Cancer Research UK Cambridge Institute, University of Cambridge (1)
Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, UK (1)
Cancer Research UK Cambridge Institute, University of Cambridge, Robinson Way, Cambridge, CB2 0RE, UK (1)
Cancer Research UK University of Cambridge Li Ka Shing Centre Robinson Way Cambridge, CB2 0RE (1)
Cancer Research UK, University of Cambridge, Li Ka Shing Centre, Robinson Way, Cambridge, CB2 0RE (1)
College of Medicine, Mohammed Bin Rashid University of Medicine and Health Sciences, Dubai, United Arab Emirates. (1)
Department of Microbiology and Immunology University of Maryland School of Medicine USA (1)
Department of Pharmaceutical Sciences, Leslie Dan Faculty of Pharmacy, University of Toronto (1)
Department of Physiology & Membrane Biology, University of California Davis School of Medicine (1)
Genetics Section Molecular and Clinical Sciences St. George's, University of London Jenner 2.142B, Cranmer Terrace London SW17 0RE (1)
Harvard Medical School Department of Medical Oncology Dana-Farber Cancer Institute 450 Brookline Ave. SM1070 Boston, MA 02215 (1)
Histon Modifications Group BioMedical Center Ludwig-Maximilians-Universität Großhadernerstr. 9 82152 Planegg-Martinsried Tel: +49 89 2180 75775 (1)
Indiana University School of Medicine (1)
Institute for Cell and Molecular Biosciences, Newcastle University, Newcastle upon Tyne, United Kingdom (1)
Institute of Molecular and Cellular Biology (1)
Ohio University (1)
Professor of Molecular Biology. Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee ,Dundee, DD1 5EH, Scotland, UK (1)
Scripps Research (1)
Senior group Leader (1)
Trinity College Dublin, Ireland (1)
University of Cambridge, Cancer Research UK Cambridge Institute, Li Ka Shing Centre, Cambridge, CB2 0RE, UK (1)
University of Edinburgh (1)

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R PheWAS: data analysis and plotting tools for phenome-wide association studies in the R environment.

Not available

S-EPMC4133579 | biostudies-literature

The Role of R-Ras Proteins in Normal and Pathologic Migration and Morphologic Change.

Not available

S-EPMC8420862 | biostudies-literature

Transcription profiling by array of human MCF cells treated with estrogen

The estrogen receptor is the master transcriptional regulator of breast cancer phenotype and the archetype of a molecular therapeutic target. We mapped all estrogen receptor and RNA polymerase II binding sites on a genome-wide scale, identifying the authentic cis binding sites and target genes, in b...

ORGANISM(S): Homo sapiens

2008-06-11 | E-GEOD-11324 | biostudies-arrayexpress

Synergistic roles of Wnt modulators R-spondin2 and R-spondin3 in craniofacial morphogenesis and dental development.

Not available

S-EPMC7954795 | biostudies-literature

A cytochrome P450 CYP87A4 imparts sterol side-chain cleavage in digoxin biosynthesis

Digoxin extracted from the foxglove plant is a widely prescribed natural product for treating heart failure. It is listed as an essential medicine by the World Health Organization. However, how the foxglove plant synthesizes digoxin is mostly unknown, especially the cytochrome P450 sterol side chain...

2025-07-03 | MTBLS7993 | MetaboLights

Potent and Selective Tetrahydroisoquinoline Kappa Opioid Receptor Antagonists of Lead Compound (3 R)-7-Hydroxy- N-[(1 S)-2-methyl-1-(piperidin-1-ylmethyl)propyl]-1,2,3,4-tetrahydroisoquinoline-3-carboxamide (PDTic).

Not available

S-EPMC6692079 | biostudies-literature

Connectome-Based Prediction of Cocaine Abstinence.

Not available

S-EPMC6481181 | biostudies-literature

Potent and Selective Tetrahydroisoquinoline Kappa Opioid Receptor Antagonists of Lead Compound (3 R)- N-[1 R)-1-(Cyclohexylmethyl)-2-methylpropyl]-7-hydroxy-1,2,3,4-tetrahydroisoquinoline-3-carboxamide (CDTic).

Not available

S-EPMC6692071 | biostudies-literature

A New Specimen of Carroll's Mystery Hupehsuchian from the Lower Triassic of China.

Not available