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MetabolomicsInterplay of CodY and CcpA in regulating central metabolism and biofilm formation in S. aureus
Not available
ORGANISM(S): Staphylococcus aureus 
ST002187 | MetabolomicsWorkbench
TranscriptomicsccpA Chromatin immunoprecipitation on chip of JIR8094 (CD630E) WT strain and a ccpA mutant after 6h of growth in TY
Comparison of ccpA Chromatine immunoprecipitation on chip using 2 strains : JIR8094 (CD630E) wild type strain and a ccpA mutant after 6h of growth in TYG. This experimental procedure was designed to investigate the consensus binding site, CRE, of pleiotropic regulator ccpA. Two-conditions experiment...
ORGANISM(S): [Clostridium] difficile 
2012-11-13 | E-GEOD-34971 | biostudies-arrayexpress
TranscriptomicsComparison of the expression profiles of 630E JIR8094 strain and a ccpA mutant
This SuperSeries is composed of the following subset Series: GSE35070: Comparison of the expression profiles of 630E JIR8094 strain and a ccpA mutant after 10h of growth in TY with 0.5% glucose. GSE35071: Comparison of the expression profiles of 630E JIR8094 strain and a ccpA mutant after 10h of gro...
ORGANISM(S): [Clostridium] difficile 
2012-10-02 | E-GEOD-35152 | biostudies-arrayexpress
TranscriptomicsComparison of the expression profiles of 630E JIR8094 strain and a ccpA mutant after 10h of growth in TY with 0.5% glucose.
Transcriptionnal profiling of C. difficile 630E JIR8094 strain vs a ccpA mutant after 10h of growth in TY with 0.5% glucose two-conditions experiments, WT strain vs ccpA mutant strain, 4 biological replicates for each condition, in an indirect design using a 8h TY RNA preparation as Reference
ORGANISM(S): [Clostridium] difficile 
2012-10-02 | E-GEOD-35070 | biostudies-arrayexpress
TranscriptomicsComparison of the expression profiles of 630E JIR8094 strain and a ccpA mutant after 10h of growth in TY.
Transcriptionnal profiling of C. difficile 630E JIR8094 strain vs a ccpA mutant after 10h of growth in TY two-conditions experiments, WT strain vs ccpA mutant strain, 4 biological replicates for each condition, in an indirect design using a 8h TY RNA preparation as Reference
ORGANISM(S): [Clostridium] difficile 
2012-10-02 | E-GEOD-35071 | biostudies-arrayexpress
TranscriptomicsClostridium difficile mutant ccpA CD630E JIR8094: growth 10h with 0.5% glucose in TY vs growth 10h in TY
transcriptionnal profiling of a ccpA mutant of C. difficile strain JIR8094 comparing growth 10h in 0.5% TY medium with growth 10h in TY medium two-conditions experiments, 0.5% glucose TY for 10h vs TY for 10h, 4 biological replicates for each condition, in an indirect design using a 8h TY RNA prepar...
ORGANISM(S): [Clostridium] difficile 
2012-10-02 | E-GEOD-35073 | biostudies-arrayexpress
TranscriptomicsProbing the regulatory effects of specific mutations in three major binding domains of the pleiotropic regulator CcpA of Bacillus subtilis
Study the effect of single amino acid point mutations in CcpA at the transcriptome level. Cells were grown in LB with or without 1% glucose and harvested at an OD600 of 0.3 (early exponential phase). Bacillus subtilis strain ccpA::spec carrying pHT304 (empty plasmid), pWH_ccpA_M17R, pWH_ccpA_T62H, o...
ORGANISM(S): Bacillus subtilis 
2015-12-24 | E-GEOD-69575 | biostudies-arrayexpress
TranscriptomicsCcpA, a Pleiotropic Key Regulator in Butanol-producing Clostridium acetobutylicum ATCC 824
Clostridium acetobutylicum is a typical bacterium of major importance to industrial butanol production. In order to dissect the regulatory network pertaining to the industrial application of this bacterium, catabolite control protein A (CcpA) was investigated for its global function by DNA microarra...
ORGANISM(S): Clostridium acetobutylicum 
2012-08-30 | E-GEOD-33364 | biostudies-arrayexpress
TranscriptomicsAssessment of CcpA-mediated catabolite control of metabolism and enterotoxin production in Bacillus cereus ATCC 14579
In Bacillus cereus the catabolite control protein CcpA was shown to be involved in optimizing the efficiency of glucose catabolism by activating genes encoding glycolytic enzymes including a non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase that mediates conversion of D-glyceraldehyde 3-p...
ORGANISM(S): Bacillus cereus ATCC 14579 
2010-05-25 | E-GEOD-7843 | biostudies-arrayexpress
TranscriptomicsMGAS5005 vs MGAS5005∆ccpA
The aim of this study was to determine the extent of the CcpA regulon in the M1 serotype MGAS5005. Kinkel and McIver, 2008 Infection and Immunity Keywords: group A streptococcus, CcpA 3 biological replicates of MGAS5005 and the isogenic ∆ccpA strain were grown, and RNA was isolated independently 3...
ORGANISM(S): Streptococcus pyogenes 
2008-06-04 | E-GEOD-11328 | biostudies-arrayexpress
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