Cd90 - OmicsDI

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Organisms

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Organisms

Homo sapiens (138)
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Repository

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Tissue

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Disease

Normal (2)
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Internal Carotid Artery Stenosis (NCI Metathesaurus C0340569) has DiseaseStaging Asymptomatic (1)
Carotid artery disease: ASYMPTOMATIC high-grade inner carotid artery stenosis (1)
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Technology Type

Mass Spectrometry (11)
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Instrument Platform

Illumina NovaSeq 6000 (23)
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NA (1)
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Publication Date

2012 (57)
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2007 (4)
2006 (4)
2005 (3)

UNIPROT ID/AC

A1L0U3 (1)
A1L347 (1)
A2A5N2 (1)
A2A7Z6 (1)
A2A838 (1)
A2AEE7 (1)
A2AR56 (1)
A2BI31 (1)
A2CG35 (1)
A2RSV8 (1)
A2RTT4 (1)
A3KGQ6 (1)
A3KML3 (1)
A4FUS1 (1)
A5GZX3 (1)
A6H6H4 (1)
A6ZI44 (1)
A7VJA4 (1)
A7VMS6 (1)
A8IP69 (1)
B1AQ77 (1)
B1AQ78 (1)
B1AR69 (1)
B2MWM9 (1)
B2RPS1 (1)
B2RRN5 (1)
B2RRX1 (1)
B2RSH2 (1)
B2RSV4 (1)
B2RTM0 (1)

ENSEMBL ID

ENSMUSG00000027651 (1)
ENSMUSP00000141097 (1)

CHEBI ID

CHEBI:181855 (1)
CHEBI:182145 (1)
CHEBI:182866 (1)
CHEBI:125539 (1)
CHEBI:181736 (1)
CHEBI:53785 (1)
CHEBI:135010 (1)
CHEBI:176310 (1)
CHEBI:181654 (1)
CHEBI:15948 (1)
CHEBI:60528 (1)
CHEBI:181913 (1)
CHEBI:7908 (1)
CHEBI:182150 (1)
CHEBI:187105 (1)
CHEBI:181761 (1)
CHEBI:64359 (1)
CHEBI:141964 (1)
CHEBI:181507 (1)
CHEBI:109547 (1)
CHEBI:166494 (1)
CHEBI:182487 (1)
CHEBI:181285 (1)
CHEBI:180526 (1)
CHEBI:189132 (1)
CHEBI:31460 (1)
CHEBI:144256 (1)
CHEBI:144239 (1)
CHEBI:144170 (1)
CHEBI:108592 (1)

Metabolite Name

(3E)-3-Benzylidene-4-Methyl-1H-1,4-Benzodiazepine-2,5-Dione (1)
(5R)-5-Hydroxy-1-(4-Hydroxy-3-Methoxyphenyl)Tetradecan-3-One (1)
1,2-Dihydroxyheptadec-16-En-4-Yl Acetate (1)
2,5-Dihydroxy-3-Undecylcyclohexa-2,5-Diene-1,4-Dione (1)
2-Naphthalene Sulfonic Acid (1)
3-Phospho-D-Glycerate (1)
3-Sulfino-L-Alanine (1)
4,4`-Thiodiphenol (1)
4-Methylumbelliferyl Sulfate (1)
5,10-Dimethoxy-2,2-Dimethylpyrano[3,2-G]Chromen-8-One (1)
5,7-Dihydroxy-2-(4-Hydroxyphenyl)-3-Methoxy-4H-Chromen-4-One (1)
5,7-Dihydroxy-6-Methoxy-2-Phenylchromen-4-One (1)
5-Chlorodivaricatinic Acid (1)
Adenosine-3-Monophosphate (1)
Alpha-D-(+)-Mannose 1-Phosphate (1)
Alpha-D-Glucose-1,6-Diphosphate (1)
Alternariol Monomethyl Ether (1)
Beta-Hydroxymyristic Acid (1)
Bisphenol S (BPS) (1)
Chlorothalonil-4-Hydroxy (1)
D-(+)-Pantothenic Acid (1)
Divaricatinic Acid (1)
Dl-3-Aminoisobutyric Acid (1)
Docosahexanoic Acid (1)
FA 13:3+1O (1)
Gluconate (Gluconic acid) (1)
Guanosine 5'-Diphospho-Beta-L-Fucose (1)
Methyl-2-Hydroxyisobutyric Acid (1)
N-[1-(4-Methoxy-6-Oxopyran-2-Yl)-2-Methylbutyl]Acetamide (1)
NAD+ (NAD zwitterion) (1)

First Public Date

2023 (28)
2020 (27)
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2019 (20)
2021 (17)
2026 (16)
2025 (16)
2022 (16)
2018 (9)
2017 (7)
2016 (4)
2015 (4)
2013 (1)

Classification

bacteria (1)

Modification

4x(2)H labeled dimethylated residue (1)

Study type

Transcription profiling by array (227)
RNA-seq of coding RNA (53)
RNA-seq of coding RNA from single cells (14)
ChIP-seq (7)
Methylation profiling by array (6)
Methylation profiling by high throughput sequencing (5)
Other (4)
RNA-seq of total RNA (4)
RNA-seq of non coding RNA (4)
Unknown experiment type (3)
MicroRNA profiling by array (3)
Animal - High-throughput sequencing (2)
Transcription profiling by RT-PCR (2)
DNA-seq (2)
Transcription profiling by SAGE (1)
Cell line - Methylation microarray (1)
Animal - One-color microarray (1)
Animal - Single-cell sequencing (1)
Human - Single-cell sequencing (1)
Cell line - One-color microarray (1)
Human - One-color microarray (1)
Comparative genomic hybridization by array (1)
ATAC-seq (1)
ScATAC-seq (1)
Single nucleus RNA sequencing (1)
Proteomic profiling by array (1)

Release Date

2019 (96)
2015 (87)
2023 (86)
2022 (81)
2021 (77)
2020 (72)
2014 (71)
2016 (70)
2012 (70)
2018 (62)
2024 (57)
2013 (56)
2017 (55)
2025 (52)
2010 (44)
2011 (38)
2026 (17)
2009 (16)
2008 (12)
2007 (6)
2006 (6)
2005 (3)
2003 (1)

Lab affiliation

Chemistry (1)
Department of Experimental Medical Science, Medical Faculty, Lund University, Lund, Sweden (1)
Department of Gynecology and Obstetrics - Ribeirao Preto Medical School - University of Sao Paulo (1)
Division of Molecular Hematology, Department of Laboratory Medicine, Lund Univsersity, Sweden (1)
Grupo de Investigación de Reumatología, INIBIC-Complejo Hospitalario Universitario de A Coruña, SERGAS, Departamento de Medicina Universidad de A Coruña, A Coruña, Spain (1)
IUSM Center for Proteome Analysis, Department of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN (1)
Mass Spectrometry Facility, Max Perutz Labs Vienna, University of Vienna, Vienna Biocenter, Dr.-Bohr-Gasse 7, 1030 Vienna (1)
Medizinische Proteom-Center 44801 Bochum, Germany (1)
Molecular Proteomics Laboratory (MPL) Biologisch-Medizinisches Forschungszentrum (BMFZ) Heinrich-Heine-Universität Düsseldorf Germany (1)
Professor & Head, Manipal Centre for Biotherapeutics Research, Manipal Academy of Higher Education, Karnataka, Manipal, 576 104, India (1)
The Smidt Heart Institute, Cedars Sinai Medical Center Cedars-Sinai Medical Center 6David Geffen School of Medicine at UCLA (1)

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Expression data comparing KYSE-140 ESCC cell line CD90+ and CD90- cells

To identify candidate genes involved in enhanced tumorigenicity and metastasis of CD90+ esophageal tumor-initiating cells. The esophageal squamous carcinoma cell (ESCC) cell line KYSE-140 was sorted into CD90+ and CD90- populations by flow cytometry. Total RNA was analyzed on Affymetrix Human Genome...

ORGANISM(S): Homo sapiens

2013-03-23 | E-GEOD-37949 | biostudies-arrayexpress

Clostridioides difficile CD90

Clostridioides difficile CD90 Genome sequencing and assembly

PRJNA85729 | ENA

Transcription profiling of human CD90+ stromal fibromuscular cells from tumor specimens reveals down-regulation in prostate tumor-associated stromal cells involves organ-specific genes

The prostate stroma is a key mediator of epithelial differentiation and development, and potentially plays a role in the initiation and progression of prostate cancer. Isolation and characterization of viable populations of the constituent cell types of prostate tumors could provide valuable insight...

ORGANISM(S): Homo sapiens

2009-09-18 | E-GEOD-17906 | biostudies-arrayexpress

Gene expression data of murine CD90- and CD90+ fibroblasts in the colon.

PRJNA414633 | ENA

The CD90+CD39+ and CD90+CD39- fibroblast subtypes in human hypertrophic scar and normal skin

PRJNA666437 | ENA

Transcriptomic analysis of primary CD105+CD90+CD13- and CD105+CD90+CD13+ mesenchymal cells in human lung

PRJNA726935 | ENA

CD90 Identifies Adventitial Mesenchymal Progenitor Cells in Adult Humans

PRJNA415629 | ENA

Gene expression data of murine CD90- and CD90+ fibroblasts in the colon.

We described differential expression of CD90 in gp38+ fibroblasts in murine colon. We functionally characterized CD90- and CD90+ fibroblasts by co-culturing with intestinal organoids. CD90+ colon fibroblasts were able to support organoid growth while CD90- did not.

ORGANISM(S): Mus musculus

2018-10-27 | GSE105102 | GEO

RNA-seq comparison of CD90- myCAFs and CD90+ myCAFs flow-sorted from murine PDAC tumors derived from the orthotopic transplantation of PDAC KPC T-LOH organoids

PRJNA1020119 | ENA

The CD90+CD39+ and CD90+CD39- fibroblast subtypes in human hypertrophic scar and normal skin

To explore the functional difference between CD90+CD39+ and CD90+CD39- fibroblasts in human hypertrophic scar and normal skin, the gene expresson microarray was performed on Live CD49f- E-Cadherin- Lin- CD45- CD31- CD90+ CD39+ and Live CD49f- E-Cadherin- Lin- CD45- CD31- CD90+ CD39- cells sorted fro...

ORGANISM(S): Homo sapiens

2021-07-05 | GSE158766 | GEO

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