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MetabolomicsMetabolomics Study On Bacterial Cellulose Biosynthesis In Komagataeibacter hansenii HDM1-3

To investigate the metabolic shift mechanism of Komagataeibacter hansenii(K. hansenii)HDM1-3 from the bacterial growth phase to the bacterial cellulose (BC) synthesis phase,untargeted metabolomics analysis was performed on K. hansenii HDM1-3 cultures at the early fermentation stage(18h) and ...

2025-12-29 | MTBLS13586 | MetaboLights
MetabolomicsHigh Cellulose diet impact on gut inflammation
Not available
ORGANISM(S): Mus musculus 
ST001297 | MetabolomicsWorkbench
TranscriptomicsTranscriptomic analysis of Clostridium thermocellum ATCC 27405 cellulose fermentation
Background: The ability of Clostridium thermocellum ATCC 27405 wild-type strain to hydrolyze cellulose and ferment the degradation products directly to ethanol and other metabolic byproducts makes it an attractive candidate for consolidated bioprocessing of cellulosic biomass to biofuels. In this st...
ORGANISM(S): Clostridium thermocellum ATCC 27405 
2011-05-27 | E-GEOD-29554 | biostudies-arrayexpress
TranscriptomicsTranscriptional profiling after inhibition of cellulose synthesis by TA and IXB in Arabidopsis thaliana suspension cells
Transcriptional profiling after inhibition of cellulose synthesis by thaxtomin A and isoxaben in Arabidopsis thaliana suspension cells; Perturbations in the cellulose content of the plant cell wall lead to global modifications in cellular homeostasis, as seen in cellulose synthase mutants or after i...
ORGANISM(S): Arabidopsis thaliana 
2009-09-15 | E-GEOD-17824 | biostudies-arrayexpress
TranscriptomicsExpression profiling of Ruminococcus flavefaciens FD-1 with growth on cellulose or cellobiose
This study compares growth of Ruminococcus flavefaciens FD-1 with cellulose or cellobiose as the carbohydrate substrate. Ruminococcus flavefaciens is a predominant cellulolytic rumen bacterium, which forms a multi-enzyme cellulosome complex that could play an integral role in the ability of this bac...
ORGANISM(S): Ruminococcus flavefaciens FD-1 
2010-05-16 | E-GEOD-15916 | biostudies-arrayexpress
TranscriptomicsDecoding the black box of cellulase formation in Hypocrea jecorina by RNA-Seq analysis
Hypocrea jecorina (anamorph Trichoderma reesei) is one of the most well studied fungi used in biotechnology industry. This fungus is today a paradigm for the comercial scale production of different plant cell wall degrading enzymes, mainly cellulases and hemicellulases. The objective of this study w...
ORGANISM(S): Trichoderma reesei 
2014-04-01 | E-GEOD-53629 | biostudies-arrayexpress
TranscriptomicsAn Arabidopsis Mutant Resistant to Thaxtomin A, a Cellulose Synthesis Inhibitor from Streptomyces Sp
Thaxtomin A is a phytotoxin produced by Streptomyces scabies and other Streptomyces species, the causative agents of common scab disease in potato and other taproot crops. At nanomolar concentrations, thaxtomin causes dramatic cell swelling, reduced seedling growth, and inhibition of cellulose synth...
ORGANISM(S): Arabidopsis thaliana 
2005-12-19 | E-GEOD-3873 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis Mutant Resistant to Thaxtomin A, a Cellulose Synthesis Inhibitor from Streptomyces
Thaxtomin A is a phytotoxin produced by Streptomyces scabies and other Streptomyces species, the causative agents of common scab disease in potato and other taproot crops. At nanomolar concentrations, thaxtomin causes dramatic cell swelling, reduced seedling growth, and inhibition of cellulose synth...
ORGANISM(S): Arabidopsis thaliana 
2010-06-06 | E-SMDB-2204 | biostudies-arrayexpress
ProteomicsDecoding the complete arsenal for cellulose and hemicellulose deconstruction in the highly efficient cellulose decomposer Paenibacillus O199
The search for new enzymes and microbial strains to degrade plant biomass is one of the most important strategies for improving the conversion processes in the production of environment-friendly chemicals and biofuels. In this study, we report a new Paenibacillus isolate, O199, which showed the high...
ORGANISM(S): Paenibacillus sp. 
2016-04-26 | PXD003970 | Pride
Proteomics Gelc-ms/ms Cellulose degradation 
TranscriptomicsGlobal gene expression patterns in Clostridium thermocellum from microarray analysis of chemostat culture on cellulose or cellobiose
Earlier studies pointed to the ability of C. thermocellum to exquisitely control gene expression in response to growth rate and the presence of insoluble cellulose or soluble compounds such as cellobiose. This microarray study was carried out in order to examine expression responses of the entire g...
ORGANISM(S): Clostridium thermocellum ATCC 27405 
2010-12-15 | E-GEOD-22426 | biostudies-arrayexpress
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