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TranscriptomicsmRNA sequence data from anterior ovarioles of w1118 virgin females of Drosophila melanogaster
Transcriptional profiling of anterior ovarioles (germaria and round previtellogenic egg chambers) of w1118 virgin females of Drosophila melanogaster 5 to 8 days post eclosion. Anterior ovarioles were dissected from w1118 virgin females 5 to 8 days post eclosion. Three independent biological replicat...
ORGANISM(S): Drosophila melanogaster 
2016-04-04 | E-GEOD-79550 | biostudies-arrayexpress
TranscriptomicsTranscriptome analysis of poplar during leaf spot infection with Sphaerulina spp.
Diseases of poplar caused by the fungal pathogen Sphaerulina musiva and related species are of growing concern, particular with the increasing interest in intensive popluliculture to meet increasing energy demands. S. musiva is able to cause infection on leaves, resulting in defoliation and canker f...
ORGANISM(S): Populus balsamifera 
2015-08-28 | E-GEOD-67697 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis Col-0, ein2-5 and ein5-1 ETHYLENE-INSENSITIVE5 encodes a 5 to 3 exoribonuclease required for posttranscriptional regulation
Ethylene is a gaseous plant growth regulator that controls a multitude of developmental and stress responses. Recently, the levels of Arabidopsis EIN3 protein, a key transcription factor mediating ethylene-regulated gene expression, have been demonstrated to increase in response to the presence of e...
ORGANISM(S): Arabidopsis thaliana 
2008-06-13 | E-GEOD-5174 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse atrioventricular junction gene expression at embryonic day 10.5-11.0
Goals of this study were to identify new candidates involved in the development of the Atrioventricular cushions in the mouse heart. Experiment Overall Design: The atrioventricular junction and ventricular region were dissected from 80 embryonic day 10.5-11.0, wild type, C57BL/6 mouse hearts. RNA w...
ORGANISM(S): Mus musculus 
2008-06-13 | E-GEOD-4903 | biostudies-arrayexpress
TranscriptomicsTranscriptional profiling of small intestinal crypts from mice treated with Notch blocking antibodies or Notch blocking antibodies in combination with an Lrp6 blocking antibody.
The goal of this study was to identify genes that are differentially expressed during a 24 hour Notch blockade and whether a Wnt antagonist (anti-Lrp6) could block this effect. 3 condition experiment, Control untreated compared to N1N2 treated, and N1N2 treated compared to N1N2_Lrp6 treated. 5 biolo...
ORGANISM(S): Mus musculus 
2015-03-11 | E-GEOD-66751 | biostudies-arrayexpress
Transcriptomics4TO7 cells: miR-23b/27b/24 overexpression vs control
Transcriptional profiling of 4TO7 cells featuring ectopic expression of miR-23b/27b/24 compared to vector control cells. Gene expression changes will be examined as potential direct targets of the miRNAs for use in later studies on metastasis suppression or activation. Two-condition experiment, miRN...
ORGANISM(S): Mus musculus 
2014-12-23 | E-GEOD-57838 | biostudies-arrayexpress
TranscriptomicsProfiling of sex-biased expression in Drosophila species
Extensive sex-biased expression has been seen in multiple surveys D. melanogaster. We were interested in broadly sampling sex-biased expression of orthologs and species- or lineage-specific genes in the Drosophila genus. To appropriately assay gene expression in multiple species, we used custom micr...
ORGANISM(S): Drosophila melanogaster 
2007-11-07 | E-GEOD-6640 | biostudies-arrayexpress
TranscriptomicsSystematic Analysis of Tissue-Restricted miRISCs Reveals a Broad Role for microRNAs in Suppressing Basal Activation of the C. elegans Pathogen Response
Gene regulation by microRNAs (miRNAs) under specific physiological conditions often involves complex interactions between multiple miRNAs and a large number of their targets, as well as coordination with other regulatory mechanisms, limiting the effectiveness of classical genetic methods to identify...
ORGANISM(S): Caenorhabditis elegans 
2012-03-23 | E-GEOD-36419 | biostudies-arrayexpress
TranscriptomicsHedgehog targets in the Drosophila embryo and the mechanisms that generate tissue-specific outputs of Hedgehog signaling
This SuperSeries is composed of the following subset Series: GSE23999: Mapping the binding regions of the cubitus interruptus (Ci) activator form GSE24024: Mapping the binding regions of the cubitus interruptus (Ci) repressor form GSE24028: Identification of genetic targets of Hh signaling in Drosop...
ORGANISM(S): Drosophila melanogaster 
2010-11-03 | E-GEOD-24055 | biostudies-arrayexpress
TranscriptomicsUncovering the Arabidopsis thaliana nectary transcriptome: nectary and reference tissues
Many flowering plants attract pollinators by offering a reward of floral nectar. Remarkably, the molecular events involved in the development of nectaries, the organs that produce nectar, as well as the synthesis and secretion of nectar itself, are poorly understood. Indeed, to date, no genes have b...
ORGANISM(S): Arabidopsis thaliana 
2009-06-15 | E-GEOD-15617 | biostudies-arrayexpress
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