Chang Chun C - OmicsDI

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Unknown (91)
Transcriptomics (32)
Proteomics (11)
Genomics (10)
Metabolomics (2)

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Homo sapiens (27)
Mus musculus (16)
Escherichia coli (3)
Arabidopsis thaliana (2)
Gastrodia elata (1)
Sus scrofa (1)
Mus (1)
Helicobacter pylori 26695 (1)

Organisms

Mus musculus (1)

Repository

biostudies-arrayexpress (32)
pride (10)
EGA (9)
MetaboLights (2)
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ENA (1)

Tissue

Cell culture (6)
Blood plasma (2)
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Permanent cell line cell (1)

Disease

Breast cancer (1)
Colon cancer (1)
Pancreatic cancer (1)

Technology Type

Mass Spectrometry (10)
Shotgun proteomics (7)
Mass spectrometry (2)
Gel-based experiment (2)
Illumina HiSeq 2000, Affymetrix SNP 6.0 (1)
SRM/MRM (1)

Instrument Platform

ND-1000 spectrophotometer (Nano-drop Technology) and Bioanalyzer 2100 (1)
Tabletop centrifuges (1)
Illumina NovaSeq 6000 (1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2016 (8)
2013 (6)
2014 (5)
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2015 (3)
2019 (2)
2022 (2)
2024 (2)
2010 (1)
2009 (1)
2008 (1)
2020 (1)
2018 (1)

CHEBI ID

CHEBI:15354 (2)
CHEBI:15428 (2)
CHEBI:15611 (2)
CHEBI:15698 (2)
CHEBI:15729 (2)
CHEBI:15741 (2)
CHEBI:15753 (2)
CHEBI:15756 (2)
CHEBI:15784 (2)
CHEBI:16015 (2)
CHEBI:16040 (2)
CHEBI:16108 (2)
CHEBI:16335 (2)
CHEBI:16450 (2)
CHEBI:16704 (2)
CHEBI:16708 (2)
CHEBI:16737 (2)
CHEBI:16750 (2)
CHEBI:16919 (2)
CHEBI:16988 (2)
CHEBI:17196 (2)
CHEBI:17319 (2)
CHEBI:17361 (2)
CHEBI:17368 (2)
CHEBI:17509 (2)
CHEBI:17562 (2)
CHEBI:17568 (2)
CHEBI:17596 (2)
CHEBI:17724 (2)
CHEBI:17748 (2)

Metabolite Name

2'-deoxycytidine (2)
5'-S-methyl-5'-thioadenosine (2)
5'-deoxyadenosine (2)
Adenine (2)
Adenosine (2)
Choline (2)
Creatine (2)
Creatinine (2)
Cytidine (2)
Cytosine (2)
D-glucitol (2)
Glycine (2)
Guanosine (2)
Hexadecanoic acid (2)
Hypoxanthine (2)
Inosine (2)
L-glutamic acid (2)
L-glutamine (2)
L-ornithine (2)
L-pipecolic acid (2)
N,N-dimethylglycine (2)
Uracil (2)
(3S)-3-hydroxy-3-methylglutaryl-CoA (1)
(5-hydroxyindol-3-yl)acetic acid (1)
(N(omega)-L-arginino)succinic acid (1)
(R)-3-(4-hydroxyphenyl)lactic acid (1)
(R)-prunasin (1)
(S)-2-hydroxyglutaric acid (1)
(S)-carnitine (1)
1-[(1R)-2-[(4-chlorophenyl)methyl]-1-(hydroxymethyl)-7-methoxy-1'-spiro[3,9-dihydro-1H-pyrido[3,4-b]indole-4,4'-piperidine]yl]-1-butanone (1)

First Public Date

2014 (1)

Modification

1x(15)N labeled L-leucine (1)

Study type

Transcription profiling by array (20)
RNA-seq of coding RNA (7)
ChIP-chip by tiling array (2)
Unknown experiment type (1)
Other (1)
Methylation profiling by array (1)

Release Date

2021 (20)
2016 (12)
2025 (11)
2020 (10)
2023 (9)
2013 (9)
2012 (8)
2024 (8)
2022 (8)
2014 (7)
2019 (5)
2018 (4)
2015 (3)
2010 (2)
2026 (2)
2017 (2)
2009 (1)
2008 (1)
2011 (1)

Lab affiliation

Stanford School of Medicine (2)
1. Graduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, Taoyuan 33302, Taiwan. 2. Molecular Medicine Research Center, Chang Gung University, Taoyuan 33302, Taiwan. 3. Department of Otolaryngology-Head and Neck Surgery, Chang Gung Memorial Hospital, Linkou 33305, Taiwan. 4. Research Center for Food and Cosmetic Safety, College of Human Ecology, Chang Gung University of Science and Technology, Taoyuan 33302, Taiwan. (1)
Chun-Hung Lin's Lab, Institute of Biological Chemistry, Academia Sinica, No. 128 Academic Road Section 2, Nan-Kang, Taipei, 11529, Taiwan (1)
Genomics Research Center, Academia Sinica (1)
Genomics Research Center, Academia Sinica, Taipei, Taiwan (1)
Graduate Institute of Biomedical Sciences, department of Cell and Molecular Biology, College of Medicine, and Molecular Medicine Research Center, Chang Gung University, Taoyuan 33302, Taiwan. Liver Research Center, Chang Gung Memorial Hospital and Chang Gung University, Taoyuan 33302, Taiwan. (1)
Institute of Molecular and Cellular Biology, National Taiwan University, Taipei, Taiwan (1)
Molecular Medicine Research Center, Chang Gung University, Taoyuan, Taiwan. (1)
NICM Heatlth research institute, Western Sydney University, NSW, Australia. (1)

Tags

xref:PubMed:23462117 (1)

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Mast cell expression data from murine aryl hydrocarbon receptor (AhR) null, AhR_d and normal control mice

We found that AhR, a unique chemical sensor, is critical in controlling mast cell differentiation, growth and function in vitro and in vivo. This study seeks to further the understanding of the mechanisms of how AhR control mast cell homeostasis. Three different batches of bone marrow derived mast c...

ORGANISM(S): Mus musculus

2013-04-01 | E-GEOD-44715 | biostudies-arrayexpress

Extracellular vesicle membrane protein profiling and targeted mass spectrometry unveil novel plasma biomarkers for detection of colorectal cancer

Extracellular vesicles (EVs) are valuable sources for the discovery of useful cancer biomarkers. This study explores the potential usefulness of tumor cell-derived EV membrane proteins as plasma biomarkers for early detection of colorectal cancer (CRC). EVs were isolated from the culture supernatant...

ORGANISM(S): Homo sapiens (Human)

2023-03-11 | PXD038871 | Pride

Remote ischemic conditioning combined with intravenous thrombolysis for acute ischemic stroke.

Not available

S-EPMC7318096 | biostudies-literature

LC-MS/MS analysis of pancreatic cancer plasma

Pancreatic cancer (PC) is an aggressive cancer with a high mortality rate, necessitating the de-velopment of effective diagnostic, prognostic and predictive biomarkers for disease manage-ment. Aberrantly fucosylated proteins in PC are considered a valuable resource of clinically useful biomarkers. T...

ORGANISM(S): Homo sapiens (Human)

2021-09-10 | PXD025150 | Pride

Itraq-based quantitative proteome Pancreatic cancer Aal Fucosylated serpina1 Plasma Glycobiomarker Reverse lectin-based elisa

Differential functions of C- and N-terminal hepatitis B x protein in liver cells treated with doxorubicin in normoxic or hypoxic condition.

Not available

S-EPMC3510201 | biostudies-literature

The optimum anticoagulation time after endovascular thrombectomy for atrial fibrillation-related large vessel occlusion stroke: a real-world study.

Not available

S-EPMC10025205 | biostudies-literature

LC-MS/MS analysis of human thyroid cystic fluid and thyroid cancer cell secreted proteins

Thyroid ultrasound and ultrasound-guided fine-needle aspiration (USG/FNA) biopsy are currently used for diagnosing papillary thyroid carcinoma (PTC), but their detection limit could be improved by combining other biomarkers. To discover novel PTC biomarkers, we herein applied a GeLC-MS/MS strategy t...

ORGANISM(S): Homo sapiens (Human)

2018-03-21 | PXD007532 | Pride

Human Thyroid cystic fluid Thyroid cancer cell Lc-ms/ms

Adjuvant heparanase inhibitor PI-88 therapy for hepatocellular carcinoma recurrence.

Not available

S-EPMC4145780 | biostudies-literature

Methylation profiling of oral squamous cell carcinoma (OSCC)

According to epidemiological studies, a vast majority, approximately 80%~90% of male OSCC patients in Taiwan habitually drink alcohol (A), and chew betel quid (B), and use cigarette (C). To assess the impact of these dietary factors on the epigenome, we conduct a high-throughput screen survey in an ...

ORGANISM(S): Homo sapiens

2015-04-01 | E-GEOD-38532 | biostudies-arrayexpress

Novel missense mutation in PTPN22 in a Chinese pedigree with Hashimoto's thyroiditis.

Not available

S-EPMC6211547 | biostudies-literature

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146 Results

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