Chang I I - OmicsDI

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Unknown (8059)
Transcriptomics (685)
Proteomics (134)
Genomics (96)
Metabolomics (30)
Other (4)
Genomic (2)
Multiomics (2)

Organisms

Homo sapiens (401)
Mus musculus (158)
Arabidopsis thaliana (32)
Corynebacterium glutamicum (13)
Corynebacterium glutamicum ATCC 13032 (13)
Triticum aestivum (11)
Escherichia coli (11)
Picea glauca (10)
Populus tremula x Populus alba (10)
Drosophila melanogaster (10)
Euphorbia esula (8)
Rattus norvegicus (8)
Populus trichocarpa x Populus deltoides (6)
Solanum lycopersicum (6)
Pseudomonas aeruginosa (5)
Gallus gallus (5)
Populus simonii (4)
Populus nigra (4)
Populus euphratica (4)
Populus trichocarpa (4)
Vitis vinifera (4)
Hordeum vulgare (4)
Sus scrofa (4)
Chlamydomonas reinhardtii (4)
Eucalyptus grandis x Eucalyptus urophylla (3)
Ursus americanus (3)
Pinus pinaster (3)
Malus domestica (3)
Oryza sativa (3)
Solanum tuberosum (3)

Organisms

Homo sapiens (5)
Mus musculus (4)
Streptococcus salivarius 57.I (1)
Rattus norvegicus (1)

Repository

biostudies-arrayexpress (721)
pride (85)
EGA (49)
iProX (30)
MetaboLights (29)
MassIVE (15)
ENA (11)
GPMDB (4)
jPOST (3)
dbGaP (2)
GNPS (1)
PanoramaPublic (1)

Tissue

Cell culture (19)
Brain (7)
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Leaf (5)
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Liver (4)
Permanent cell line cell (4)
Whole body (4)
Blood (3)
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HeLa cell (2)
Kidney (2)
Macrophage (2)
Somatic cell (2)
Stem cell (2)
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Diploid cell (1)
Endothelial cell (1)
Epithelial cell of cervix (1)
Esophagus (1)
Fibroblast (1)
Flower (1)
Gastrointestinal tract (1)
Haploid cell (1)
Head and neck squamous cell carcinoma cell (1)
Macrophage cell line (1)
Mammary gland (1)
Monocyte (1)
T cell (1)

Disease

Breast cancer (8)
Normal (7)
Not Available (4)
Disease free (3)
ACUTE MYELOID LEUKEMIA (2)
Colorectal cancer (2)
Chronic lymphocytic leukemia (2)
Lung cancer (2)
Cervix carcinoma (2)
Osteosarcoma (2)
Parasitic infectious disease (2)
Breast Normal (1)
Intestinal type gastric cancer (1)
CHRONIC LYMPHOCYTIC LEUKEMIA (1)
NORMAL (1)
Nonfunctioning endocrine tumors (1)
B-cell chronic lymphocytic leukemia (1)
Small interference (1)
Squamous cell carcinoma (1)
Colon adenocarcinoma (1)
Papillary thyroid carcinoma (1)
Acute Myeloid Leukemia (1)
Acute promyelocytic leukemia (1)
Gastric cancer (1)
Colorectal adenocarcinoma (1)
Adenocarcinoma (1)
Central nervous system cancer (1)
Cervical cancer (1)
Acute myeloid leukemia (1)
Acute leukemia (1)

Technology Type

Mass Spectrometry (85)
Shotgun proteomics (32)
Mass spectrometry (27)
Bottom-up proteomics (22)
Data-dependent acquisition (16)
Data-independent acquisition (8)
Affinity purification coupled with mass spectrometry proteomics (7)
Top-down proteomics (7)
SWATH MS (5)
Illumina HiSeq 2000 (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Gel-based experiment (2)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
AB SOLiD System 3.0 (1)
CAPILLARY, AB 3730xL Genetic Analyzer (1)
Illumina HiSeq 2000, Affymetrix SNP 6.0 (1)
Illumina HiSeq 2500, ILLUMINA (1)
Illumina MiSeq (1)
Mass spectrometry assay (1)
NMR spectroscopy (1)
Affinity proteomics (1)
HDMSE (1)
Immunopeptidomics (1)
Mass spectrometry imaging (1)

Instrument Platform

Scanning hardware (9)
Illumina HiSeq 2000 (9)
Q Exactive (6)
ScanArray 4000XL [PerkinElmer] (5)
Illumina HiSeq 2500 (4)
NextSeq 500 (4)
Instrument (4)
Illumina MiSeq (3)
Illumina NovaSeq 6000 (3)
Illumina HiSeq 4000 (3)
Illumina Genome Analyzer IIx (2)
Illumina HiSeq 1500 (2)
NextSeq 550 (2)
Active Motif Catalog No. 53150 (1)
ShARC (1)
Agilent 2100 (1)
Axon GenePix 4000B scanner (1)
FACS (1)
ScanArrayExpress (1)
454 GS 20 (1)
ScanArray 5000 [PerkinElmer] (1)
Axon- GenePix4000B (1)
GenePix 4000B [Axon Instruments] (1)
Axon GenePix 4000B scanning hardware (1)
Illumina NovaSeq X (1)
NA (1)
Ion Torrent Proton (1)
TruSeq mRNA Sample Prep kit v2 (Illumina) (1)
Illumina HiSeq 3000 (1)
6560 Q-TOF LC/MS (1)

Publication Date

2010 (137)
2014 (117)
2012 (77)
2013 (69)
2011 (67)
2015 (62)
2016 (40)
2008 (38)
2009 (31)
2022 (30)
2021 (28)
2026 (26)
2005 (25)
2025 (23)
2024 (22)
2023 (22)
2007 (19)
2020 (16)
2019 (14)
2006 (10)
2018 (5)
2017 (4)
2004 (2)

CHEBI ID

CHEBI:15741 (13)
CHEBI:16708 (11)
CHEBI:30769 (11)
CHEBI:32816 (11)
CHEBI:17568 (10)
CHEBI:17596 (10)
CHEBI:17822 (10)
CHEBI:16449 (9)
CHEBI:18012 (9)
CHEBI:26271 (9)
CHEBI:30915 (9)
CHEBI:6650 (9)
CHEBI:15428 (8)
CHEBI:15891 (8)
CHEBI:16335 (8)
CHEBI:16450 (8)
CHEBI:16610 (8)
CHEBI:16750 (8)
CHEBI:16811 (8)
CHEBI:17148 (8)
CHEBI:17748 (8)
CHEBI:25017 (8)
CHEBI:27897 (8)
CHEBI:28044 (8)
CHEBI:7916 (8)
CHEBI:15354 (7)
CHEBI:15698 (7)
CHEBI:15756 (7)
CHEBI:16113 (7)
CHEBI:16199 (7)

Metabolite Name

Alanine (6)
Creatinine (6)
Glycine (6)
Adenine (5)
Azelaic acid (5)
Citric acid (5)
Cysteine (5)
Inosine (5)
Kynurenic acid (5)
Leucine (5)
Methionine (5)
Proline (5)
Putrescine (5)
Serine (5)
Succinic acid (5)
Uracil (5)
Valine (5)
3-phosphoglycerate (4)
4-Pyridoxic acid (4)
Adenine (4)
Adenosine (4)
Dodecanedioic acid (4)
Guanosine (4)
L-Methionine (4)
Malic acid (4)
Pantothenic acid (4)
Phosphatidylethanolamine (4)
Spermidine (4)
Thymidine (4)
Uric acid (4)

First Public Date

2014 (3)
2019 (2)
2026 (1)
2024 (1)
2021 (1)
2017 (1)
2015 (1)
2013 (1)

Classification

bacteria (1)

Study type

Transcription profiling by array (458)
RNA-seq of coding RNA (73)
Unknown experiment type (48)
MicroRNA profiling by array (26)
ChIP-seq (24)
Comparative genomic hybridization by array (14)
ChIP-chip by tiling array (12)
Other (11)
Methylation profiling by array (9)
RNA-seq of non coding RNA (8)
Methylation profiling by high throughput sequencing (7)
DNA-seq (5)
Plant - High-throughput sequencing (4)
ChIP-chip by array (4)
Genotyping by array (3)
Transcription profiling by RT-PCR (3)
Transcription profiling by tiling array (2)
RIP-seq (2)
RNA-seq of total RNA (2)
Differential (1)
RNAi profiling by array (1)
Bisulfite-seq (1)
ATAC-seq (1)
Single nucleus RNA sequencing (1)
Genotyping by high throughput sequencing (1)

Release Date

2022 (1019)
2021 (933)
2023 (931)
2025 (865)
2024 (763)
2020 (668)
2019 (532)
2018 (476)
2017 (379)
2016 (377)
2015 (338)
2014 (310)
2010 (212)
2012 (198)
2013 (193)
2011 (152)
2026 (120)
2009 (88)
2008 (86)
2005 (42)
2007 (37)
2006 (22)
2004 (13)
2003 (8)
2001 (5)
2000 (4)
2002 (2)
1999 (2)
1998 (2)
1997 (2)

Lab affiliation

Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA (2)
Department of Infectious Diseases, University Hospital Zurich, University of Zurich, Zurich, Switzerland (2)
Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA. (2)
Vetsuisse Faculty (VET), Department of Molecular Mechanisms of Disease, University of Zurich (UZH) (2)
Yale University Department of Chemistry (2)
1. Graduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, Taoyuan 33302, Taiwan. 2. Molecular Medicine Research Center, Chang Gung University, Taoyuan 33302, Taiwan. 3. Department of Otolaryngology-Head and Neck Surgery, Chang Gung Memorial Hospital, Linkou 33305, Taiwan. 4. Research Center for Food and Cosmetic Safety, College of Human Ecology, Chang Gung University of Science and Technology, Taoyuan 33302, Taiwan. (1)
1. Victor Chang Cardiac Research Institute, Darlinghurst, NSW, 2010 2. St Vincent’s Hospital, Darlinghurst, NSW, 2010 3. University of New South Wales Sydney, Kensington, NSW, 2052 (1)
Academia Sinica (1)
Associate Professor of Chemistry, University of California, Riverside (1)
Beijing proteome research center, Beijing, China (1)
Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, 13355 Berlin, Germany. Wellcome Center for Cell Biology, University of Edinburgh, Edinburgh, EH9 3BF, United Kingdom. (1)
Central South University of Forestry and Technology (1)
Chang Gung University Department of Medical Biotechnology and Laboratory Science (1)
Changhai Hospital, Naval Medical University (1)
Charité Universitätsmedizin, Department of Biochemistry, 10117 Berlin, Germany The Wellcome Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford OX3 7BN, UK Max Planck Institute for Molecular Genetics, Berlin, Germany (1)
Clinical Neuroproteomics Unit Navarrabiomed Proteored-ISCIII Pamplona-Spain (1)
College of Pharmacy, Jinan University, Guangzhou 510632, P. R. China (1)
Columbia University Irving Medical Center, New York, NY, USA (1)
Cornell University (1)
DZNE - German Center for Neurodegenerative Diseases Munich, Neuroproteomics, Feodor-Lynen Str. 17, D-81377 Munich, Germany (1)
Department of Biological Sciences, College of Natural Sciences, Seoul National University, Seoul, 08826, Republic of Korea (1)
Department of Cancer Research and Molecular Medicine Faculty of Medicine Laboratory Centre, 5th floor. Erling Skjalgssons gt. 1 Norwegian University of Science and Technology NTNU 7006 Trondheim, Norway Tel: +47 72573076; Fax: +47 72576400 Cell. phone: +47 91825455 (1)
Department of Chemistry, Korea University, Seoul 02841, Republic of Korea (1)
Department of Life Science, Institute of Molecular and Cellular Biology, National Taiwan University, Taipei, Taiwan. (1)
Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Sweden Centre for Inherited Metabolic Diseases, Karolinska University Hospital, Sweden (1)
Department of Medical Biotechnology and Laboratory Sciences, College of Medicine, Chang Gung University, Taiwan (1)
Department of Medical Laboratory Science, College of Medicine, I-Shou University, Kaohsiung city, Taiwan (1)
Department of Medicine, School of Clinical Science, Faculty of Medicine, Nursing & Health Science, Monash University, Clayton, VIC, Australia (1)
Department of Microbiology, Sungkyunkwan University School of Medicine, Suwon 16419, Republic of Korea (1)
Department of Pediatrics Medizinische Fakultät Carl Gustav Carus Technische Universität Dresden 01307 Dresden, Germany (1)

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Streptococcus salivarius 57.I

Streptococcus salivarius 57.I genome sequencing project

PRJNA68129 | ENA

HCMV ER-I G4 binding protein LC-MS/MS

The pull-down assay to identify viral and cellular proteins binding to ER-I G4 (see Materials and Methods).

ORGANISM(S): Human herpesvirus 5 strain Toledo Homo sapiens (Human)

2024-08-30 | PXD050439 | Pride

Hcmv er-i g4

Thermoplastic Starch with Poly(butylene adipate-co-terephthalate) Blends Foamed by Supercritical Carbon Dioxide.

Not available

S-EPMC9145724 | biostudies-literature

Characterization of Methicillin-Resistant Staphylococcus aureus Isolates from Periprosthetic Joint Infections.

Not available

S-EPMC9316792 | biostudies-literature

Digital Genomic Footprinting by Dnase I of fetal liver derived erythroid cells

Base-pair level resolution of DNase susceptibility of the native chromatin state. These maps represent and are dependent upon the nature and the specificity of interaction of the DNA with the regulatory/modulatory proteins binding at specific loci in the genome; thus they represent the native chrom...

ORGANISM(S): Homo sapiens

2014-03-05 | E-GEOD-55579 | biostudies-arrayexpress

Suppressive Effects of Siegesbeckia orientalis Ethanolic Extract on Proliferation and Migration of Hepatocellular Carcinoma Cells through Promoting Oxidative Stress, Apoptosis and Inflammatory Responses.

Not available

S-EPMC9351687 | biostudies-literature

Systemic Analyses of Anti-Cell-Senescence Active Compounds in Camellia Sect. Chrysantha Chang and Their Mechanisms.

Not available

S-EPMC11314071 | biostudies-literature

Multimedia Mixed Reality Interactive Shared Decision-Making Game in Children with Moderate to Severe Atopic Dermatitis, a Pilot Study.

Not available

S-EPMC10047264 | biostudies-literature

Comprehensive functional genomic analyses link APC somatic mutation and mRNA-miRNA networks to the clinical outcome of stage-III colorectal cancer patients.