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TranscriptomicsATAC-seq of CP-A Barrett's oesophagus cells
The open chromatin of Barrett's oesophagus cell line CP-A has been profiled by ATAC-seq.
ORGANISM(S): Homo sapiens 
2020-09-30 | E-MTAB-8994 | biostudies-arrayexpress
TranscriptomicsATAC-seq of human Barrett's oesophagus tissue
Barrett's esophagus is the assumed precusor to oesophageal adenocarcinoma. We profiled the open chromatin of human Barrett's biopsies to gain insight into its molecular basis.
ORGANISM(S): Homo sapiens 
2019-02-04 | E-MTAB-6751 | biostudies-arrayexpress
TranscriptomicsATAC-seq of Het1A cells with overexpression of HNF4A or GATA6
To determine the ability of HNF4A and GATA6 to drive open chromatin formation, either HNF4A or GATA6 were overexpressed in normal oesophageal Het1A cells and ATAC-seq was performed.
ORGANISM(S): Homo sapiens 
2019-02-04 | E-MTAB-6931 | biostudies-arrayexpress
UnknownRandomized phase III multi-institutional study of TNFerade biologic with fluorouracil and radiotherapy for locally advanced pancreatic cancer: final results.
Not available
S-EPMC4820756 | biostudies-literature
TranscriptomicsModeling Inducible Human Tissue Neoplasia Identifies an ECM Interaction Network Involved in Cancer Progression
To elucidate mechanisms of cancer progression, we generated inducible human neoplasia in 3-dimensionally intact epithelial tissue. Gene expression profiling of both epithelia and stroma at specific time points during tumor progression revealed sequential enrichment of genes mediating discrete biolog...
ORGANISM(S): Mus musculus 
2009-06-02 | E-GEOD-15299 | biostudies-arrayexpress
ProteomicsDRT1 FLAG Pulldown Raw Data from Exploris 480
We aim to see what T4 phage and/or E. coli proteins interact with our DRT1 enzyme. We have conducted a pulldown assay using N-terminally MBP-tagged DRT1, both for WT and RT-inactive mutant.
ORGANISM(S): Escherichia Coli 
2026-07-10 | PXD070039 | JPOST Repository
UnknownBlocking cancer-fibroblast mutualism inhibits proliferation of endocrine resistant breast cancer.
Not available
S-SCDT-10_1038-S44320-025-00104-6 | biostudies-other
ProteomicsThe Global Phosphorylation Landscape of SARS-CoV-2 Infection
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the causative agent of the coronavirus disease 2019 (COVID-19) pandemic, has infected over 3 million people worldwide and caused over 200,000 deaths since it emerged in late 2019. There is an urgent need to develop therapies that can limi...
ORGANISM(S): Chlorocebus Aethiops (ncbitaxon:9534) 
2020-07-15 | MSV000085759 | MassIVE
TranscriptomicsSCL006,icSARS CoV Urbani or icSARS Bat SRBD (spike receptor binding domain from the wild type strain Urbani to allow for infection of human and non-human primate cells) infections of the 2B4 clonal derivative of Calu-3 cells - Time course
Purpose of experiment was to compare transcriptomics of 2B4 cells (clonal derivative of Calu-3 cells) infected with either icSARS CoV or the icSARS deltaORF6 mutant. Calu-3 cells were infected with either icSARS CoV or the cSARS Bat SRBD strain at MOI of 1.0. Cells samples were collected at 0, 7, 1...
ORGANISM(S): Homo sapiens 
2012-05-06 | E-GEOD-37827 | biostudies-arrayexpress
GenomicsEstrogen Receptor Positive Breast Cancer: Aromatase Inhibitor Response Study

Highly variable outcomes are observed in patients with estrogen receptor positive (ER+) breast cancer who undergo preoperative estrogen deprivation therapy with aromatase inhibitors (AI). In this study, 46 tumor and normal genomes and 31 exomes of participants selected from two clinical trials of...

phs000472.v1.p1 | EGA
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