Chang Song S - OmicsDI

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Unknown (1023)
Proteomics (24)
Genomics (18)
Transcriptomics (17)
Metabolomics (5)
Multiomics (1)

Organisms

Homo sapiens (36)
Mus musculus (7)
Arabidopsis thaliana (2)
Vitis labrusca x Vitis vinifera (1)
Trichinella spiralis (1)
Populus simonii (1)
Populus trichocarpa (1)
Gallus gallus (1)
Rattus norvegicus (1)
Parabacteroides goldsteinii DSM 19448 = WAL 12034 (1)
Saccharomyces cerevisiae (1)
Camellia oleifera (1)
Chlamydomonas reinhardtii (1)
Mycobacterium tuberculosis H37Rv (1)
Setaria italica (1)

Repository

biostudies-arrayexpress (18)
EGA (17)
pride (13)
iProX (9)
MetaboLights (5)
MassIVE (2)

Tissue

Cell culture (4)
Blood plasma (2)
Colon (2)
Epithelial cell (2)
Fibroblast (1)
Leaf (1)
Permanent cell line cell (1)
Skin (1)

Disease

Breast cancer (1)
Colon cancer (1)
Lymphoma (1)
Pancreatic cancer (1)

Technology Type

Mass Spectrometry (13)
Shotgun proteomics (8)
Mass spectrometry (5)
Gel-based experiment (2)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
Illumina HiSeq 2000 (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Bottom-up proteomics (1)
Data-independent acquisition (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (4)
Liquid Chromatography MS - negative - reverse phase (3)
LTQ Orbitrap Elite (1)
Orbitrap Fusion Lumos (1)
MS Imaging - (1)

Publication Date

2024 (6)
2013 (5)
2022 (5)
2015 (4)
2014 (4)
2019 (4)
2023 (4)
2025 (4)
2006 (2)
2021 (2)
2012 (1)
2011 (1)
2010 (1)
2008 (1)
2026 (1)
2020 (1)
2018 (1)

CHEBI ID

CHEBI:116314 (2)
CHEBI:15354 (2)
CHEBI:15756 (2)
CHEBI:17295 (2)
CHEBI:17351 (2)
CHEBI:17895 (2)
CHEBI:19065 (2)
CHEBI:27432 (2)
CHEBI:28875 (2)
CHEBI:30805 (2)
CHEBI:32368 (2)
CHEBI:545687 (2)
CHEBI:70744 (2)
CHEBI:7916 (2)
CHEBI:10319 (1)
CHEBI:11060 (1)
CHEBI:114444 (1)
CHEBI:1148 (1)
CHEBI:116735 (1)
CHEBI:121879 (1)
CHEBI:12575 (1)
CHEBI:128477 (1)
CHEBI:131988 (1)
CHEBI:132223 (1)
CHEBI:134761 (1)
CHEBI:136063 (1)
CHEBI:136083 (1)
CHEBI:136084 (1)
CHEBI:136619 (1)
CHEBI:139312 (1)

Metabolite Name

(5-hydroxyindol-3-yl)acetic acid (1)
(R)-prunasin (1)
(S)-2-hydroxyglutaric acid (1)
(S)-carnitine (1)
1-Eicosanol (1)
1-Linoleoylglycerol (1)
1-Monomyristin (1)
1-Oleoyl-Sn-Glycerol (1)
1-[(1R)-2-[(4-chlorophenyl)methyl]-1-(hydroxymethyl)-7-methoxy-1'-spiro[3,9-dihydro-1H-pyrido[3,4-b]indole-4,4'-piperidine]yl]-1-butanone (1)
1-alpha-Linolenoyl-glycerol (1)
1-methyladenosine (1)
1-methylguanosine (1)
1-methylinosine (1)
10-Undecenoic acid (1)
10-formyltetrahydrofuran (1)
11-Octadecanoic acid (Vaccenic acid) (1)
12,13-DHOME;(9Z)-12,13-Dihydroxyoctadec-9-enoic acid (1)
13(S)-HODE;13(S)-Hydroxyoctadeca-9Z,11E-dienoic acid (1)
13-methylmyristic acid (1)
13S-Hydroperoxy-9Z,11E-octadecadienoic acid (1)
13S-Hydroxy-9Z,11E,15Z-octadecatrienoic acid (1)
17-Hydroxylinolenic acid (1)
1H-imidazole (1)
1H-indole (1)
2'-deoxycytidine (1)
2'-deoxyinosine (1)
2-Linoleoylglycerol (1)
2-alpha-Linolenoyl-glycerol (1)
2-hydroxybutyric acid (1)
2R-hydroxy-9Z,12Z,15Z-octadecatrienoic acid (1)

Study type

Transcription profiling by array (9)
RNA-seq of coding RNA (3)
Unknown experiment type (1)
Genotyping by array (1)
Comparative genomic hybridization by array (1)
Methylation profiling by array (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (143)
2022 (124)
2021 (111)
2023 (105)
2024 (101)
2020 (89)
2015 (66)
2018 (52)
2016 (51)
2019 (45)
2014 (28)
2017 (28)
2013 (25)
2026 (19)
2012 (15)
2011 (14)
2010 (9)
2008 (4)
2009 (4)
2006 (3)
2005 (2)
2004 (2)
2000 (1)

Lab affiliation

1. Graduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, Taoyuan 33302, Taiwan. 2. Molecular Medicine Research Center, Chang Gung University, Taoyuan 33302, Taiwan. 3. Department of Otolaryngology-Head and Neck Surgery, Chang Gung Memorial Hospital, Linkou 33305, Taiwan. 4. Research Center for Food and Cosmetic Safety, College of Human Ecology, Chang Gung University of Science and Technology, Taoyuan 33302, Taiwan. (1)
Central South University of Forestry and Technology (1)
Changhai Hospital, Naval Medical University, Shanghai, 200433, China. (1)
Department of Gastroenterology, The First Affiliated Hospital of Naval Medical University, Shanghai, 200433, China (1)
Department of Life Sciences, Pohang University of Science and Technology (POSTECH), Pohang, Republic of Korea (South Korea) (1)
Department of Molecular Medicine, CMRI, Exosome Convergence Research Center (ECRC), School of Medicine, Kyungpook National University, Daegu, Republic of Korea. (1)
Graduate Institute of Biomedical Sciences, department of Cell and Molecular Biology, College of Medicine, and Molecular Medicine Research Center, Chang Gung University, Taoyuan 33302, Taiwan. Liver Research Center, Chang Gung Memorial Hospital and Chang Gung University, Taoyuan 33302, Taiwan. (1)
Institute for Basic Science and Seoul National University (1)
Molecular Medicine Research Center, Chang Gung University, Taoyuan, Taiwan. (1)
Northwest A&F University (1)
Proteomic Platform of Institut de Microbiologie de la Méditerranée CNRS 3479 (1)
School of Biological Sciences, Seoul National University (1)
Zhengzhou University (1)

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Pre-treatment with angiotensin-(1-7) inhibits tumor growth via autophagy by downregulating PI3K/Akt/mTOR signaling in human nasopharyngeal carcinoma xenografts.

Not available

S-EPMC7095977 | biostudies-literature

Tadalafil ameliorates bladder overactivity by restoring insulin-activated detrusor relaxation via the bladder mucosal IRS/PI3K/AKT/eNOS pathway in fructose-fed rats.

Not available

S-EPMC8050041 | biostudies-literature

APOBEC3A is an Oral Cancer Prognostic Biomarker in Taiwanese Carriers of an APOBEC Deletion Polymorphism

Chen T-W, Lee C-C, Liu H, Wu C-S, Pickering CR, Huang P-J, et al., Nature Communications 8, Article number: 465 (2017) doi:10.1038/s41467-017-00493-9

Oral squamous cell carcinoma is a prominent cancer worldwide, p...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2019-08-28 | MSV000084250 | MassIVE

Extracellular vesicle membrane protein profiling and targeted mass spectrometry unveil novel plasma biomarkers for detection of colorectal cancer

Extracellular vesicles (EVs) are valuable sources for the discovery of useful cancer biomarkers. This study explores the potential usefulness of tumor cell-derived EV membrane proteins as plasma biomarkers for early detection of colorectal cancer (CRC). EVs were isolated from the culture supernatant...

ORGANISM(S): Homo sapiens (Human)

2023-03-11 | PXD038871 | Pride

HCMMCNVs: Hierarchical Clustering Mixture Model of Copy Number Variants Detection using Whole Exome Sequencing Technology.

Not available

S-EPMC8479678 | biostudies-literature

MiR-122 in hepatitis B virus and hepatitis C virus dual infection.

Not available

S-EPMC4381172 | biostudies-literature

LC-MS/MS analysis of pancreatic cancer plasma

Pancreatic cancer (PC) is an aggressive cancer with a high mortality rate, necessitating the de-velopment of effective diagnostic, prognostic and predictive biomarkers for disease manage-ment. Aberrantly fucosylated proteins in PC are considered a valuable resource of clinically useful biomarkers. T...

ORGANISM(S): Homo sapiens (Human)

2021-09-10 | PXD025150 | Pride

Itraq-based quantitative proteome Pancreatic cancer Aal Fucosylated serpina1 Plasma Glycobiomarker Reverse lectin-based elisa

Chromosome‐level genome of Camellia lanceoleosa provides a valuable resource for understanding genome evolution and self‐incompatibility

The section Oleifera (Theaceae) has attracted attention for the high levels of unsaturated fatty acids found in its seeds. Here, we report the chromosome-scale genome of the sect. Oleifera using diploid wild Camellia lanceoleosa with a final size of 3.00 Gb and an N50 s...

2022-07-14 | MTBLS3769 | MetaboLights

LC-MS/MS analysis of human thyroid cystic fluid and thyroid cancer cell secreted proteins

Thyroid ultrasound and ultrasound-guided fine-needle aspiration (USG/FNA) biopsy are currently used for diagnosing papillary thyroid carcinoma (PTC), but their detection limit could be improved by combining other biomarkers. To discover novel PTC biomarkers, we herein applied a GeLC-MS/MS strategy t...

ORGANISM(S): Homo sapiens (Human)

2018-03-21 | PXD007532 | Pride

Human Thyroid cystic fluid Thyroid cancer cell Lc-ms/ms

Gut commensal bacteria Parabacteroides goldsteinii JCM 13446 derived-outer membrane vesicles suppress skin inflammation in psoriasis

Proteomic analysis of outer membrane vesicles derived from Parabacteroides goldsteinii JCM 13446

ORGANISM(S): Parabacteroides Goldsteinii Dsm 19448 = Wal 12034

2024-10-17 | PXD056885 |

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