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MetabolomicsGNPS - MS/MS networking guided analysis of molecule and gene cluster families - Figure 4
Paper Title: MS/MS networking guided analysis of molecule and gene cluster families Author List: Don Duy Nguyen, Cheng-Hsuan Wu, Wilna J. Moree, Anne Lamsa, Marnix H. Medema, Xiling Zhao, Ronnie G. Gavilan, Marystella Aparicio, Librada Atencio, Chanaye Jackson, Javier Ballesteros, Joel Sanchez, Jer...
ORGANISM(S): Pseudoalteromonas Piscicida Jcm 20779t Pseudoalteromonas 04m1a Pseudoalteromonas Ot59 
2014-02-18 | MSV000078551 | GNPS
MetabolomicsGNPS - MS/MS networking guided analysis of molecule and gene cluster families - Figure 1
Paper Title: MS/MS networking guided analysis of molecule and gene cluster families Author List: Don Duy Nguyen, Cheng-Hsuan Wu, Wilna J. Moree, Anne Lamsa, Marnix H. Medema, Xiling Zhao, Ronnie G. Gavilan, Marystella Aparicio, Librada Atencio, Chanaye Jackson, Javier Ballesteros, Joel Sanchez, Jer...
ORGANISM(S): Bacillus Es382 Bacillus Es341 Bacillus Es221 Bacillus Es342 Bacillus Es386 Bacillus Es222 Bacillus Es343 Bacillus Es387 Bacillus Es223 Bacillus Gp24 Bacillus Ls18 Bacillus Es345 Bacillus Gp25 Bacillus Es20 Bacillus Zk4636 Pseudomonas Ch36 Bacillus Zk4678 Bacillus Zk4633 Pseudomonas Rw10s2 Pseudomonas Rw10s1 Bacillus Es190 Bacillus Fzb42 Pseudomonas Putdia Pseudomonas 3w11m1 Bacillus Es332 Bacillus Es333 Bacillus Es335 Bacillus Es336 Bacillus Es337 Pseudomonas Es60 Pseudomonas C52 Bacillus Subtilis 3610 Bacillus Es120 Pseudomonas Hcl17 Pseudomonas Es11 Bacillus Es44 Pseudomonas Es97 Bacillus Py79 Bacillus Ls276 Bacillus Lcts Bacillus Qbm1551 Pseudomonas Aurantiaca Pseudomonas Bw10s1 Pseudomonas Pa14 Bacillus Es392 Pseudomonas Rw951 Bacillus Es73 Bacillus Es113 Bacillus Ls29 Bacillus Es114 Bacillus Ls28 Bacillus Es115 Bacillus Es76 Bacillus Kp1032 Bacillus Es118 Pseudomonas Pa01 Bacillus Lct22 Pseudomonas Bw11p2 
2014-02-18 | MSV000078552 | GNPS
ModelsLiao2011 - Genome-scale metabolic reconstruction of Klebsiella pneumoniae (iYL1228)
Liao2011 - Genome-scale metabolic reconstruction of Klebsiella pneumoniae (iYL1228) This model is described in the article: An experimentally validated genome-scale metabolic reconstruction of Klebsiella pneumoniae MGH 78578, iYL1228. Liao YC, Huang TW, Chen FC, Charusanti P...
2024-10-15 | BIOMD0000001094 | BioModels
ModelsThiele2011 - Genome-scale metabolic network of Salmonella Typhimurium (STM_v1_0)
Thiele2011 - Genome-scale metabolic network of Salmonella Typhimurium (STM_v1_0) This model is described in the article: A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2. Thiele I, Hyduke DR, Steeb B, Fankam ...
2015-07-30 | MODEL1507180017 | BioModels
TranscriptomicsGenome-wide identification of RNA polymerase, RpoD, and RpoS binding sites in Klebsiella pneumoniae MGH 78578
Genome-wide identification of RNA polymerase (RNAP) binding sites were performed in Klebsiella pneumoniae MGH 78578 (KP). Anti-RNAP is used to capture the RNAP in KP. ChIP-chip was performed on tiling array specifically made for KP. Comparison ChIP by anti-RNAP antibody vs ChIP by normal mouse IgG (...
ORGANISM(S): Klebsiella pneumoniae subsp. pneumoniae MGH 78578 
2012-12-31 | E-GEOD-35927 | biostudies-arrayexpress
TranscriptomicsGenome-wide gene expression analysis for Klebsiella pneumoniae MGH 78578
Genome-wide gene expression analysis was performed with the cells in exponential and stationary growth phases. Through these two growth status, 89.6% of currently annotated genes were expressed. High-density oligonucleotide tiling arrays consisting of 379,528 50-mer probes spaced 30 bp apart across ...
ORGANISM(S): Klebsiella pneumoniae subsp. pneumoniae MGH 78578 
2012-12-31 | E-GEOD-35926 | biostudies-arrayexpress
ProteomicsE.coli - Whole organism, Gly and lac substrate, SC (Lewis,mol_syst_biol,2010)
abundance based on Spectral counting, Gly and Lac substrate, Interaction consistency score: 6.5, Coverage: 21
ORGANISM(S): 511145 
2010-00-00 | 1076937984 | PAXDB
MetabolomicsGNPS Mara1 Heterologous expression in S. albidoflavus J1074
Heterologous expression of Mara1 in S. ablidoflavus J1074. Mara1 is from S. mirabilis P8-A2
ORGANISM(S): Streptomyces Albidoflavus (ncbitaxon:1886) 
2024-01-26 | MSV000093927 | GNPS
ProteomicsProgrammable polyketide biosynthesis platform for production of aromatic compounds in yeast
To accelerate the shift to bio-based production and overcome complicated functional implementation of natural and artificial biosynthetic pathways to industry relevant organisms, development of new, versatile, bio-based production platforms are required. Here we present a novel yeast platform for bi...
ORGANISM(S): Saccharomyces Cerevisiae 
2020-02-11 | PXD013388 | panorama
MetabolomicsGNPS - GNPS Paper Novel Stenothricin Analog Supporting Information.
Mass spectrometry data, NMR, and sequencing data in support of the discovery of stenothricin-GNPS. Secondary metabolite production of Streptomyces Roseosporus was compared against Streptomyces DSM5940.
ORGANISM(S): Streptomyces (ncbitaxon:1883) 
2015-07-30 | MSV000079204 | GNPS
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