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UnknownA long noncoding RNA, lincRNA-Tnfaip3, acts as a coregulator of NF-κB to modulate inflammatory gene transcription in mouse macrophages.
Not available
S-EPMC6191062 | biostudies-literature
ProteomicsGlobaGlobal involvement of lysine crotonylation in protein modification and transcription regulation in ricel involvement of lysine crotonylation in protein modification and transcription regulation in rice
Lysine crotonylation (Kcr) is a newly discovered post-translational modification (PTM) existing in mammalian. Here, we performed a global crotonylome analysis of rice (Oryza sativa L. japonica) using high accuracy nano-LC-MS/MS in combination with crotonylated peptide enrichment. A total of 1,265 ly...
ORGANISM(S): Oryza sativa (Rice) 
2018-07-23 | PXD008716 | Pride
Oryza sativa Post-translational modification Crotonyl lysine Histone lysine 
TranscriptomicsExpression data from adult Arabidopsis roots under 200uM cadmium (Cd) treatment
To massively identify genes that are up-regulated by Cd and in particular transporter genes which might transport peptides or oligopeptides. Four week old hydroponically-grown Col-0 plants were treated with/without 200uM Cd for 6 hours. Total RNA was extracted from roots and subjected to hybridizat...
ORGANISM(S): Arabidopsis thaliana 
2010-06-16 | E-GEOD-22114 | biostudies-arrayexpress
ProteomicsIdentification of Ngo-B interacting proteins
Proteins interacting with Nogo-B were identified by CO-IP mass spectrometry
ORGANISM(S): Homo sapiens (Human) 
2024-07-29 | PXD046118 | Pride
Nogo-b co-ip ms 
ProteomicsProteome-wide analyses reveal the diverse functions of lysine 2-hydroxyisobutyrylation in Oryza sativa
Lysine 2-hydroxyisobutyrylation (Khib), a newly identified post-translational modification, is known to regulate transcriptional activity in animals. However, extensive studies of the lysine 2-hydroxyisobutyrylome in plants and animals have yet to be performed. In this study, using LC-MS/MS qualitat...
ORGANISM(S): Oryza sativa (Rice) 
2021-09-09 | PXD018778 | Pride
Oryza sativa  lysine 2-hydroxyisobutyrylation photosynthesis histone acylation 
UnknownGenome-wide characterization of the MBF1 gene family and its expression pattern in different tissues and stresses in Zanthoxylum armatum.
Not available
S-EPMC9472409 | biostudies-literature
UnknownGLP-1RA Liraglutide Attenuates Sepsis by Modulating Gut Microbiota and Associated Metabolites.
Not available
S-EPMC12899774 | biostudies-literature
UnknownUltra-low-dose PET reconstruction using generative adversarial network with feature matching and task-specific perceptual loss.
Not available
S-EPMC6692211 | biostudies-literature
MetabolomicsPu-erh tea and theabrownin ameliorate metabolic syndrome in mice via potential microbiota-gut-liver-brain interactions
Metabolic syndrome (MS) is a common metabolic disorder characterized by obesity, insulin resistance, cardiovascular disease and gut microbiota dysbiosis. Pu-erh tea and its ingredient theabrownin have known functions on the reduction of body weight gain and fat accumulation. However, few studies sys...
2024-09-25 | MTBLS2594 | MetaboLights
ProteomicsOryza sativa,Global proteome,LC-MSMS
Rice is one of the most important global food crops, and is also a model organism for cereal research 31 . Complete genome sequencing of rice, together with advances in transcriptomics and proteomics, has had a dramatic impact on plant growth and 5 breeding programs 32 . Genomic analysis of DNA meth...
ORGANISM(S): Oryza sativa (Rice) 
2017-11-13 | PXD004870 | Pride
Acetylome Oryza sativa Lysine acetylation Calvin cycle. Photosynthesis Global proteomics 
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