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TranscriptomicsTranscriptome comparison reveals a genetic network regulating the lower temperature limit in fish
Transcriptional plasticity is a major driver of phenotypic differences between species. The lower temperature limit (LTL), namely the lower end of survival temperature, is an important trait delimiting the geographical distribution of a species, however, the genetic mechanisms are poorly understood....
ORGANISM(S): Danio rerio 
2016-07-03 | E-GEOD-69965 | biostudies-arrayexpress
TranscriptomicsGlobal identification of the gene networks and cis-regulatory elements of the cold response in zebrafish
The transcriptional programs of ectothermic teleosts are directly influenced by water temperature. Although various cold-responsive transcriptional patterns have been determined in fishes, the systematic molecular networks governing the temperature responses are still unknown. We profiled the transc...
ORGANISM(S): Danio rerio 
2015-08-06 | E-GEOD-62221 | biostudies-arrayexpress
GenomicsDNA methylome patterns of zebrafish cells under cold pressure
In this study, MeDIP-seq and RNA-seq were performed to reveal a genome-wide methylation profile of zebrafish (Danio rerio) embryonic fibroblast cell line (ZF4) and its variation under cold environment.This study puts a new insight into the genome-wide epigenetic regulation under cold environment. ZF...
ORGANISM(S): Danio rerio 
2016-07-30 | E-GEOD-71567 | biostudies-arrayexpress
TranscriptomicsMicroRNA-mediated gene regulation plays a minor role in the transcriptomic plasticity of cold-acclimated Zebrafish brain tissue
Growing evidence shows that miRNAs play essential roles in cell development by regulating the growth and differentiation of cell lineages. However, the potential roles of miRNA-mediated regulation in the environmental adaptation of organisms are largely unknown. To examine this potential regulatory ...
ORGANISM(S): Danio rerio 
2011-10-28 | E-GEOD-32092 | biostudies-arrayexpress
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