Cheng Yu Y - OmicsDI

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Unknown (3528)
Proteomics (110)
Transcriptomics (28)
Genomics (24)
Metabolomics (21)
Multiomics (6)

Organisms

Homo sapiens (68)
Bombyx mori (45)
Klebsiella pneumoniae (45)
Schizosaccharomyces pombe (45)
Streptomyces coelicolor A3(2) (45)
Human immunodeficiency virus 1 (45)
Oryza sativa Indica Group (45)
Sinorhizobium meliloti BL225C (45)
Vitis (45)
Sus scrofa domesticus (45)
Ostreococcus tauri (45)
Saccharomyces cerevisiae (45)
Mus musculus (21)
Saccharomyces cerevisiae (3)
Arabidopsis thaliana (3)
Oryza sativa (2)
Grapholita molesta (2)
Drosophila melanogaster (2)
Brassica oleracea (1)
Bombyx mori (1)
Glycine max (1)
Elaphe taeniura (1)
Cardamine circaeoides (1)
Candida albicans CAS15 (1)
Serratia marcescens LCT-SM213 (1)
Capsella rubella (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Solanum lycopersicum (1)
Zea mays (1)
Rattus norvegicus (1)

Repository

iProX (53)
pride (45)
biostudies-arrayexpress (33)
MetaboLights (20)
EGA (19)
MassIVE (5)
jPOST (4)
PeptideAtlas (3)
GNPS (1)

Tissue

Cell culture (8)
Leaf (5)
Others (3)
Kidney (3)
T cell (3)
Byssus (2)
Malignant cell (2)
Plant cell (2)
Blood serum (2)
Root (2)
Liver (2)
Blood (2)
Peritoneal macrophage (1)
T-cell acute lymphoblastic leukemia cell (1)
Preadipocyte (1)
Sperm (1)
Seed (1)
JURKAT cell (1)
Diploid cell (1)
Early embryonic cell (1)
Leukocyte (1)
Macrophage (1)
Heart (1)
Brain (1)
Blood plasma (1)
Testis (1)
Whole body (1)
Spleen (1)
Hepatocyte (1)
Lung (1)

Disease

Acute leukemia (3)
Prostate adenocarcinoma (2)
Disease free (2)
Multidrug-resistant tuberculosis (1)
Coronavirus infectious disease (1)
Skin melanoma (1)
Liver cancer (1)

Technology Type

Mass Spectrometry (45)
Shotgun proteomics (18)
Mass spectrometry (17)
Affinity purification coupled with mass spectrometry proteomics (8)
Data-dependent acquisition (6)
Bottom-up proteomics (6)
Proteogenomics (4)
Illumina HiSeq 2000 (2)
Mass spectrometry assay (2)
Data-independent acquisition (2)
Gel-based experiment (2)
Top-down proteomics (2)
NMR spectroscopy (1)
Olink affinity proteomics (1)
Affinity proteomics (1)
DiaPASEF (1)
SRM/MRM (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (12)
Liquid Chromatography MS - positive - reverse phase (8)
MS:1000031 (3)
Illumina HiSeq 2000 (2)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (2)
LTQ Orbitrap Elite (2)
LTQ FT (1)
MaXis (1)
Orbitrap Eclipse (1)
Orbitrap Exploris 480 (1)
Liquid Chromatography MS - Positive (LC-MS (POS)) (1)
6530 Q-TOF LC/MS (Agilent) (1)
Q Exactive (1)
Liquid Chromatography MS - (1)
Nuclear Magnetic Resonance (NMR) - (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
QExactive (1)

Publication Date

2025 (20)
2022 (16)
2024 (13)
2021 (11)
2014 (10)
2023 (9)
2026 (8)
2020 (7)
2019 (7)
2012 (6)
2010 (6)
2018 (6)
2016 (5)
2015 (5)
2013 (5)
2017 (3)
2009 (2)
2011 (1)

UNIPROT ID/AC

Q6ZVE7 (3)
Q99619 (3)
Q8N4U5 (3)
Q9UBZ4 (3)
Q96QP1 (3)
Q9Y576 (3)
Q6ZTQ3 (3)
Q9H633 (3)
Q96PC5-2 (3)
Q96PC5 (3)
Q8TDW5 (3)
Q9NXZ2 (3)
Q8IZP6 (3)
Q9UHA2 (3)
Q6MZQ0 (3)
Q9C019 (3)
Q96EP1 (3)
Q8IYM2 (3)
Q86SJ2 (3)
Q02833 (3)
O43194 (3)
Q9Y2C3 (3)
O00338 (3)
Q6NSJ2 (3)
Q17R98 (3)
Q9Y664 (3)
Q9UNP4 (3)
Q96BZ9 (3)
Q8WUA8 (3)
Q3MII6 (3)

ENSEMBL ID

ENSG00000247315 (3)
ENSG00000147251 (3)
ENSG00000170477 (3)

CHEBI ID

CHEBI:16359 (7)
CHEBI:15354 (7)
CHEBI:16708 (6)
CHEBI:16704 (6)
CHEBI:32816 (6)
CHEBI:16737 (6)
CHEBI:16919 (6)
CHEBI:17368 (6)
CHEBI:15611 (5)
CHEBI:17126 (5)
CHEBI:16525 (5)
CHEBI:17562 (5)
CHEBI:17361 (5)
CHEBI:15741 (5)
CHEBI:6650 (5)
CHEBI:16335 (5)
CHEBI:17568 (5)
CHEBI:16467 (5)
CHEBI:16449 (5)
CHEBI:28834 (5)
CHEBI:16015 (5)
CHEBI:78320 (5)
CHEBI:17895 (5)
CHEBI:17295 (5)
CHEBI:17596 (5)
CHEBI:16828 (5)
CHEBI:16552 (4)
CHEBI:16450 (4)
CHEBI:16543 (4)
CHEBI:16755 (4)

Metabolite Name

Creatine (5)
Inosine (4)
Hypoxanthine (4)
Adenine (4)
Choline (4)
Uracil (4)
Uridine (3)
Proline (3)
Guanosine (3)
Cytidine (3)
Xanthine (3)
Methionine (3)
Creatinine (3)
Alanine (3)
Lactate (3)
Valine (3)
Adenosine (3)
Glycine (3)
L-glutamic acid (3)
1-methyladenosine (3)
L-tyrosine (3)
L-glutamine (3)
4-anisic acid (2)
N-acetyl-L-alanine (2)
D-glucitol (2)
N,N-dimethylglycine (2)
L-pipecolic acid (2)
4-coumaric acid (2)
Adenosine monophosphate (2)
Valeric acid (2)

Modification

Not available (1)

Study type

RNA-seq of coding RNA (13)
Transcription profiling by array (9)
Methylation profiling by array (4)
ChIP-seq (3)
Methylation profiling by high throughput sequencing (2)
Unknown experiment type (1)
Other (1)

Release Date

2025 (610)
2022 (499)
2024 (476)
2023 (446)
2021 (384)
2020 (257)
2019 (169)
2018 (160)
2017 (123)
2016 (104)
2015 (81)
2026 (69)
2014 (66)
2013 (35)
2012 (23)
2011 (20)
2010 (14)
2009 (10)
2008 (8)
2005 (2)
2002 (2)
2007 (1)
2004 (1)
2003 (1)

Lab affiliation

Yazhouwan National Laboratory, Sanya 572024, China (3)
Department of Urology, Emory University School of Medicine, Atlanta, GA, USA (1)
1Department of Pathophysiology, Key Laboratory of Cell Differentiation and Apoptosis of Chinese Ministry of Education, Shanghai Jiao Tong University School of Medicine (SJTU-SM), Shanghai 200025, China. 2Institute of Health Sciences, Shanghai Institutes for Biological Sciences of Chinese Academy of Sciences and SJTU-SM, Shanghai 200025, China. (1)
Institute of Bioengineering, College of Chemical and Biological Engineering, Zhejiang University, Hangzhou, Zhejiang 310027, China (1)
1Department of Pathology, Dana-Farber/Harvard Cancer Center, PhD Program in Immunology, Harvard Medical School; Department of Laboratory Medicine, Boston Children's Hospital, Enders Research Building, Room 811, Boston, MA, 02115, USA (1)
Institute of Plant Science of Paris-Saclay (IPS2), CNRS, INRA, Université Paris-sud 11, Université Paris-Saclay, 91405 Orsay, France (1)
National key laboratory of medical immunology, Naval medical university, Shanghai, China (1)
China Pharmaceutical University (1)
Affiliated hospital of Nantong university (1)
College of Marine Life Sciences, Ocean University of China, Qingdao, China (1)
College of Polymer Science and Engineering, State Key Laboratory of Polymer Materials Engineering, Sichuan University, Chengdu, 610065, People's Republic of China (1)
Children's Hospital of Soochow University, Suzhou (1)
Department of Internal Medicine V, Heidelberg University Hospital, 69120 Heidelberg, Germany (1)
Department of Immunobiology, College of Life Science and Technology, Jinan University, Guangzhou, China. (1)
Key Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Beijing Key Laboratory of Protein Posttranslational Modifications and Cell Function, Department of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Peking University Health Science Center, Beijing 100191, China (1)
Department of Cellular and Molecular Pharmacology University of California San Francisco (UCSF) San Francisco, CA 94158 USA (1)
1. Precision Medicine Research Programme, Yong Loo Lin School of Medicine, National University of Singapore, Singapore. 2. Cardiovascular Disease Research Programme, Yong Loo Lin School of Medicine, National University of Singapore, Singapore. 3. Department of Biochemistry, Yong Loo Lin School of Medicine, National University of Singapore, Singapore. (1)
Department of Molecular Biology; Kang Lab; Princeton University, Princeton, NJ, USA (1)
1Department of Hematology, Tongji Hospital, Frontier Science Center for Stem Cell Research, Shanghai Key Laboratory of Signaling and Disease Research, School of Life Sciences and Technology, Tongji University, Shanghai, 200092, China (1)
Department of Biology, University of Florida (1)
Department of Endocrinology, Xiang’an Hospital of Xiamen University, School of Medicine, Xiamen University (1)
Institute of Interdisciplinary Medicine, Shanghai University of Traditional Chinese Medicine, Shanghai 201203, China (1)
Department of Microbiology & Immunology, 2the Cancer Center, Medical College of Wisconsin Department of Medicine, Medical College of Wisconsin, Milwaukee, WI (1)
Weill Institute for Cell and Molecular Biology, Department of Computational Biology, Cornell University (1)
Departments of Critical Care Medicine, the First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang, 150001, China. (1)
Division of Pediatric Gastroenterology, Department of Pediatrics, Stanford University, Palo Alto, CA, 94304, USA. (1)
Hangzhou Women's Hospital, Hangzhou, China (1)
Shanghai Center for Systems Biomedicine, Shanghai Jiao Tong University, Shanghai, China. (1)
Shanghai Jiao Tong University School of Medicine (1)
Institute of Pediatric Research, Children's Hospital of Soochow University, Suzhou, China. (1)

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The complete chloroplast genome of Lonicera fulvotomentosa Hsu et S. C. Cheng and its phylogenetic analysis.

Not available

S-EPMC7971229 | biostudies-literature

Quantitative TMT proteomics of brainstem in spontaneously hypertensive rats

The brainstem, the core of the central nervous system, plays a vital role in controlling arterial blood pressure and its elevation of hypertension subtypes, especially essential hypertension. Integrative metabolic and proteomic profiling was performed on the brainstem samples of 11-week-old spontane...

ORGANISM(S): Rattus norvegicus (Rat)

2020-09-24 | PXD021210 | Pride

Qin-Yu-Qing-Chang decoction reshapes colonic metabolism by activating PPAR-γ signaling to inhibit facultative anaerobes against DSS-induced colitis.

Not available

S-EPMC11425999 | biostudies-literature

Non-stapled, total laparoscopic Roux-en-Y anastomosis: A safe and effective procedure for radical pediatric choledochal cyst excision.

Not available

S-EPMC10825765 | biostudies-literature

Mechanism of protective effect of xuan-bai-cheng-qi decoction on LPS-induced acute lung injury based on an integrated network pharmacology and RNA-sequencing approach.

Not available

S-EPMC8237774 | biostudies-literature

Alterations in the Metabolic and Lipid Profiles Associated with Vitamin D Deficiency in Early Pregnancy.

Not available

S-EPMC12526048 | biostudies-literature

PRODH regultes naive pluripotency by influencing mitochondrial oxidative phosphorylation (Untargeted metabolomics)

Naïve human embryonic stem cells (hESCs) that resemble the pre-implantation epiblasts are fueled by a combination of aerobic glycolysis and oxidative phosphorylation, but their mitochondrial regulators are poorly understood. Here we report that, proline dehydrogenase (PRODH), a mitochondria-local...

2024-02-12 | MTBLS7840 | MetaboLights

Exosome-delivered and Y RNA-derived small RNA suppresses influenza virus replication.

Not available

S-EPMC6694579 | biostudies-literature

Bandgap adjustment assisted preparation of >18% Cs _y FA_1-y PbI _x Br_3-x -based perovskite solar cells using a hybrid spraying process.

Not available

S-EPMC9032767 | biostudies-literature

Lendenfeldaranes W-Y, new 24-homoscalaranes from a marine sponge <i>Lendenfeldia</i> species.

Not available

S-EPMC12624399 | biostudies-literature

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3711 Results

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Organisms

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