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TranscriptomicsExpression profiling of normal lung parenchyma
2 normal lung parenchyma SAGE libraries, generated from 2 pools of 4 individuals each Discussed in the study: IDENTIFICATION OF NOVEL LUNG GENES IN BRONCHIAL EPITHELIUM BY SERIAL ANALYSIS OF GENE EXPRESSION Kim M. Lonergan1, Raj Chari1, Ronald J. deLeeuw1, Ashleen Shadeo1, Bryan Chi1, Ming-Sound T...
ORGANISM(S): Homo sapiens 
2006-11-20 | E-GEOD-3708 | biostudies-arrayexpress
TranscriptomicsBJAB Cell Lines Unmodified, Transduced with ith lentiviral vector pNL-SIN-CMV-AcGFP or pNL-SIN-CMV-AcGFP/miR-K12-11
All metazoan eukaryotes express microRNAs (miRNAs), ~22 nt long regulatory RNAs that can repress the expression of mRNAs bearing complementary sequences. Several DNA viruses also express miRNAs in infected cells, suggesting a role in viral replication and pathogenesis. While specific viral miRNAs ha...
ORGANISM(S): Homo sapiens 
2007-12-18 | E-GEOD-8867 | biostudies-arrayexpress
TranscriptomicsChromatin immunoprecipitation of yeast to identify genomic binding locations of yeast transcription machinary factors Reb1, Rpb3, Rpo21, Rsc9, Sua7 and Swr1
High-resolution genome-wide mapping of the yeast transcription machinery. ChIP-chip was performed to identify the genomic binding locations for each factor.

Processed data files are also available on the FTP server for this experiment.
ORGANISM(S): Saccharomyces cerevisiae 
2009-02-14 | E-MEXP-1676 | biostudies-arrayexpress
TranscriptomicsChromatin immunoprecipitation of yeast transcription machinary using oligonucleotide arrays
A canonical organization of the transcription pre-initiation complex and its regulators. High-resolution genome-wide mapping of the yeast transcription machinery was performed for each factor using ChIP-chip.
ORGANISM(S): Saccharomyces cerevisiae 
2009-02-15 | E-MEXP-1677 | biostudies-arrayexpress
TranscriptomicsExpression profiling of bronchial epithelium
19 bronchial epithelial SAGE libraries were constructed and analyzed in this study. Discussed in the study: IDENTIFICATION OF NOVEL LUNG GENES IN BRONCHIAL EPITHELIUM BY SERIAL ANALYSIS OF GENE EXPRESSION Kim M. Lonergan1, Raj Chari1, Ronald J. deLeeuw1, Ashleen Shadeo1, Bryan Chi1, Ming-Sound Tsa...
ORGANISM(S): Homo sapiens 
2006-07-14 | E-GEOD-3707 | biostudies-arrayexpress
Transcriptomics90 min Met4 hyperactivation ChIP-chip
Identification of in vivo binding targets of Met4 and Met32 by conducting chromatin immunoprecipitation studies using genomic tiling arrays (ChIP-on-chip 4X44K whole yeast genome arrays by Agilent) following 90 minutes Met4 hyperactivation.
ORGANISM(S): Saccharomyces cerevisiae 
2012-02-21 | E-MEXP-3302 | biostudies-arrayexpress
UnknownWho do freestanding emergency departments treat? Comparing Texas hospitals to satellite and independent freestanding departments in 2021 and 2022.
Not available
S-EPMC11249826 | biostudies-literature
TranscriptomicsChromatin immunoprecipitation of yeast to identify genes whose distribution of TBP and Sua7 was consistent with TFIIB (Sua7) mediated gene looping
ChIP-chip analysis of TBP and Sua7 was performed to identify genes whose distribution of TBP and Sua7 was consistent with TFIIB (Sua7) mediated gene looping. Two biological replicates were performed for each factor and the mock IP control.
ORGANISM(S): Saccharomyces cerevisiae 
2009-03-03 | E-MEXP-1584 | biostudies-arrayexpress
TranscriptomicsChromatin immunoprecipitation of Drosophila Schneider 2 cells using NELF-E and NELF-B antibodies
ChIP-chip analysis of GAGA factor and NELF in Drosophila S2 cells
ORGANISM(S): Drosophila melanogaster 
2008-04-04 | E-MEXP-1547 | biostudies-arrayexpress
TranscriptomicsChromatin immunopreciptitation of Drosophila DNA using antibodies against RMA polymerase II CTD repeats
Crosslinked chromatin from wild type flies was sonicated into small fragments, and used in ChIP reactions using a monoclonal antibody, 8WG16, against RNA polymerase II CTD repeats. Input material was removed prior to chIP, and a control chIP was incubated with normal rabbit IgG. The Input and IPed...
ORGANISM(S): Drosophila melanogaster 
2008-05-20 | E-MEXP-1520 | biostudies-arrayexpress
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