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MetabolomicsTranscriptome and Metabolome Analyses Reveal Differences in Terpenoid and Flavonoid Biosynthesis in Cryptomeria fortunei Needles Across Different Seasons

Cryptomeria fortunei (Chinese cedar) has outstanding medicinal value due to its abundant flavonoid and terpenoid contents. The metabolite contents of C. fortunei needles differ across different seasons. However, the biosynthetic mechanism of these differentially synthesized meta...

2022-08-12 | MTBLS4099 | MetaboLights
TranscriptomicsTranscription profiling of Arabidopsis plants with the chlorophyll removed by combining enhancer trap and RNAi approaches
Chlorophyll was removed from the veins of the C3 plant Arabidopsis by combining enhancer trap and RNAi approaches. Three independent transgenic lines were created. These were each compared to the parent line, J1511, in a microarray experiment.
ORGANISM(S): Arabidopsis thaliana 
2009-12-01 | E-MEXP-1988 | biostudies-arrayexpress
TranscriptomicsGene expression study after 3 days of salt exposure in a Solanum tuberosum cultivar called Desirée
The molecular response to salt exposure was studied in the leaves of an S. tuberosum clone using cDNA microarray. Differentially expressed genes were classified according to their known or predicted function and their expression ratio as compared to the control. The major changes upon a 150 mM NaCl ...
ORGANISM(S): Solanum tuberosum 
2011-12-03 | E-GEOD-34116 | biostudies-arrayexpress
TranscriptomicsGene expression study after 1 and 3 days of salt exposure in a Solanum tuberosum cultivar called PS3
The molecular response to salt exposure was studied in the leaves of a S. tuberosum clone using cDNA microarray. Differentially expressed genes were classified according to their known or predicted function and their expression ratio as compared to the control. The major changes upon a 150 mM NaCl e...
ORGANISM(S): Solanum tuberosum 
2010-05-05 | E-GEOD-18053 | biostudies-arrayexpress
TranscriptomicsHeterosis of Arabidopsis C24 x Col hybrids is associated with increased photosynthesis capacity.
Arabidopsis thaliana shows hybrid vigour (heterosis) in progeny of crosses between Col and C24 accessions (1). Hybrid vigour was evident as early as the mature seeds and in the seedlings 3 days after sowing (DAS). At 3 DAS genes encoding chloroplast-located proteins were significantly overrepresen...
ORGANISM(S): Arabidopsis thaliana 
2012-03-06 | E-GEOD-36273 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse liver in conditional knockouts of the tumor suppressor gene Apc identifies Wnt/bet-catenin signaling activation in hepatocytes
A "Cartes d'Identite des Tumeurs" (CIT) project from the french Ligue Nationale Contre le Cancer (http://cit.ligue-cancer.net). Conditional Knockout mouse model for the tumor suppressor gene Ap, Apc 2lox. The disruption of the Apc gene is realized by injection of an adenovirus encoding the Cre recom...
ORGANISM(S): Mus musculus 
2006-03-13 | E-TABM-81 | biostudies-arrayexpress
TranscriptomicsTranscriptome in Col, C24, and their F1 at 10 DAS
We compared the expression among three lines, Col, C24, and their hybrids at 10 days after sowing (DAS). Whole plants without root in Col, C24, and their F1 hybrids with three replications.
ORGANISM(S): Arabidopsis thaliana 
2013-02-19 | E-GEOD-32281 | biostudies-arrayexpress
TranscriptomicsExpression data from Arabidopsis wild-type, sicy-192, and sicy-192 gun1-101 plants
Plastid gene expression (PGE) acts as a signal that regulates the expression of photosynthesis-associated nuclear genes (PhANGs) via GENOMES UNCOUPLED1 (GUN1)-dependent retrograde signaling. We recently isolated Arabidopsis sugar-inducible cotyledon yellow-192 (sicy-192), a gain-of-function mutant o...
ORGANISM(S): Arabidopsis thaliana 
2013-09-14 | E-GEOD-50857 | biostudies-arrayexpress
TranscriptomicsTranscription profiling by microarray of barley mutant (G132) and its wild type (Hordeum vulgare cv. Graphic) under high CO2 concentration
This experiment showed the microarray expression of a barley recessive mutant (G132) and its wild type (Hordeum vulgare cv. Graphic) under high CO2 concentration. The homozygous mutation has a strong pleiotropic nature affecting many aspects of plant. In order to identify target genes of this mutati...
ORGANISM(S): Hordeum vulgare 
2017-02-07 | E-MTAB-4942 | biostudies-arrayexpress
TranscriptomicsDigital gene expression analysis of ACMV-infected cassava
Cassava mosaic disease caused by cassava begomoviruses is the most serious disease of cassava in Africa. However, the molecular mechanisms leading to symptom development of infected cassava plants are poorly understood. Here a high throughput digital gene expression profiling (DGE) based on Illumina...
ORGANISM(S): Manihot esculenta 
2014-04-01 | E-GEOD-47224 | biostudies-arrayexpress
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