Childhood cancer

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Unknown (7175)
Transcriptomics (2547)
Genomics (1160)
Proteomics (131)
Multiomics (37)
Clinical (26)
Methylation profiling (26)
Genomic (24)
Metabolomics (16)
Other (11)
Models (1)

Organisms

Homo sapiens (2419)
Mus musculus (674)
Rattus norvegicus (51)
Drosophila melanogaster (19)
Danio rerio (16)
Gallus gallus (9)
Canis lupus familiaris (8)
Marmota monax (7)
Halobacterium salinarum (7)
Schizosaccharomyces pombe (6)
Oncorhynchus mykiss (4)
Arabidopsis thaliana (4)
Viruses (2)
unidentified (2)
Streptomyces coelicolor (2)
Ovis aries (2)
Caenorhabditis elegans (2)
Escherichia coli (2)
gut metagenome (1)
Dorea longicatena DSM 13814 (1)
Ehrlichia chaffeensis str. Arkansas (1)
Vitis sp. cv. 'Norton' (1)
Shigella sonnei (1)
Meleagris gallopavo (1)
Aspergillus flavus (1)
Influenza A virus (1)
Haemophilus influenzae R2866 (1)
Arachis hypogaea (1)
Neisseria gonorrhoeae (1)
Leishmania major (1)

Organisms

Homo sapiens (354)
Mus musculus (38)
Rattus norvegicus (8)
Danio rerio (5)
Gallus gallus (3)
Bos indicus x Bos taurus (2)
human gut metagenome (2)
Helicobacter pylori (1)
Macaca mulatta (1)
synthetic construct (1)
Caenorhabditis elegans (1)

Repository

biostudies-arrayexpress (2580)
EGA (488)
ENA (487)
geo (199)
PeptideAtlas (43)
pride (41)
MassIVE (32)
dbGaP (24)
MetaboLights (16)
jPOST (9)
PanoramaPublic (2)
ExpressionAtlas (1)
Cell Collective (1)
iProX (1)

Tissue

Others (27)
Cell culture (15)
Female Reproductive System (5)
Liver (5)
Male Reproductive System (4)
B cell (4)
Brain (4)
Cerebrospinal fluid (4)
Permanent cell line cell (4)
Blood plasma (3)
Bone marrow (3)
Liver (3)
Neuroblastoma cell line (3)
Kidney (2)
Medulloblastoma cell (2)
Neuroblastoma cell (2)
Neuron (2)
Adrenal Gland (1)
Digestive System (1)
Acute lymphoblastic leukemia cell line (1)
Bile (1)
Bile duct (1)
Blood (1)
Blood cell (1)
Blood serum (1)
Blood-lymph (1)
Bone marrow-derived macrophage (1)
Cell suspension culture (1)
Cerebellum (1)
Cerebrospinal fluid secretion (1)

Disease

Acute myeloid leukemia (7)
Acute promyelocytic leukemia (2)
Alveolar rhabdomyosarcoma (2)
Atypical teratoid rhabdoid tumor (2)
Mantle cell lymphoma (2)
Adenosquamous lung carcinoma (1)
Adrenal gland neuroblastoma (1)
Adult B acute lymphoblastic leukemia (1)
Adult T acute lymphoblastic leukemia (1)
Adult T-cell leukemia/lymphoma (1)
Adult acute megakaryoblastic leukaemia (1)
Adult acute monocytic leukemia (1)
Adult acute myeloid leukemia (1)
Amelanotic melanoma (1)
Ampulla of Vater adenocarcinoma (1)
Anaplastic astrocytoma (1)
Anaplastic large cell lymphoma (1)
Askin tumor (1)
Astrocytoma (1)
B-cell acute lymphoblastic leukemia (1)
B-cell non-Hodgkins lymphoma (1)
B-cell prolymphocytic leukemia (1)
Barrett adenocarcinoma (1)
Basaloid squamous cell carcinoma (1)
Bladder carcinoma (1)
Burkitts lymphoma (1)
Epstein-Barr virus-related Burkitt lymphoma (1)
Ewing sarcoma (1)
Hodgkins lymphoma (1)
T-cell acute lymphoblastic leukemia (1)

Technology Type

Illumina HiSeq 2000 (26)
Illumina HiSeq 2500 (7)
Illumina HiSeq 2500, ILLUMINA (2)
ILLUMINA, Illumina HiSeq 2500 (2)
ILLUMINA, Illumina HiSeq 2000 (2)
Illumina Genome Analyzer IIx, Illumina HiSeq 2000 (2)
Illumina HiSeq 2500, Illumina HiSeq 2000 (2)
Illumina HiSeq 2000, Illumina Genome Analyzer II (2)
ILLUMINA, Illumina HiSeq 2500, Ion Torrent PGM, ION_TORRENT (1)
HiSeq X Ten (ILLUMINA) (1)
Genome-Wide Human SNP Array 6.0 - Thermo Fisher Scientific (1)
HiSeq X Ten, Illumina HiSeq 2000, Illumina MiSeq, ILLUMINA, Illumina HiSeq 2500 (1)
Illumina HiSeq 2000, Illumina Infinium HumanMethylation450 BeadChip, Affymetrix expression array, ILLUMINA (1)
OXFORD_NANOPORE, MinION (1)
Illumina Infinium 1.2M array (1)
Infinium OncoArray-500K BeadChip (1)
Illumina HiScanSQ, ILLUMINA (1)
ABI_SOLID, AB 5500xl Genetic Analyzer, AB SOLiD 4 System (1)
Illumina HiSeq 3000 (1)
NextSeq 500, Illumina HiScanSQ (1)
AB 5500xl Genetic Analyzer (1)
Complete Genomics, Illumina HiSeq 2000 (1)
454 GS FLX Titanium (1)
Illumina HumanOmniExpress-12 v1., Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, Illumina Genome Analyzer IIx (1)
Complete Genomics (1)
Illumina HiSeq 2000, HumanMethylation450k Bead Chip - Genome Studio, Illumina Genome Analyzer IIx (1)
Complete Genomics, unspecified (1)
Illumina MiSeq (1)
Illumina Genome Analyzer II (1)

Instrument Platform

Illumina NovaSeq 6000 (35)
Illumina HiSeq 2500 (31)
NextSeq 500 (26)
Illumina HiSeq 2000 (23)
Illumina HiSeq 4000 (19)
Illumina MiSeq (9)
NextSeq 550 (7)
Illumina Genome Analyzer IIx (5)
HiSeq X Ten (4)
2100 Bioanalyzer Agilent (3)
DNBSEQ-G400 (3)
Scanning of was performed on an Axon 4000B scanner (2)
Illumina HiSeq (2)
Intel Core 2 Duo E8500 3.16 GHz or equivalent (2)
ScanArray Express HT [PerkinElmer] (2)
Illumina Genome Analyzer II (2)
Illumina HiSeq 1500 (2)
Illumina HiSeq 3000 (2)
NanoString nCounter (1)
Using NEBNext Ultra II DNA Library (1)
FACSAria III (BD Sciences) (1)
BD Rhapsody Express Instrument (1)
HPC (1)
Nanostring GeoMx spatial profiler (1)
Chromium Controller (1)
10x Genomics Chromium (1)
FACSAria III (1)
Illumina protocol (1)
GeneChip® Scanner 3000 7G (Affymetrix) (1)
(Make:Affymetrix Scanner,Model:) (1)

Publication Date

2014 (381)
2010 (322)
2013 (317)
2015 (313)
2012 (310)
2011 (240)
2016 (175)
2008 (162)
2009 (121)
2022 (73)
2021 (72)
2007 (58)
2020 (57)
2023 (52)
2025 (51)
2024 (41)
2005 (31)
2019 (30)
2017 (30)
2026 (26)
2018 (21)
2006 (17)
2004 (14)
2003 (1)

UNIPROT ID/AC

A0A024RC46 (43)
A2BFH1 (43)
A5A3E0 (43)
A6NHL2 (43)
A6NNZ2 (43)
A8MTJ3 (43)
B1AK88 (43)
B2RPK0 (43)
B3KML9 (43)
B3KT93 (43)
B4DHB3 (43)
B4DKM5 (43)
B4DL86 (43)
B4DRV9 (43)
B4DY08 (43)
B4E3A4 (43)
B9VP19 (43)
C9JSZ1 (43)
D3DPU2 (43)
E5RK69 (43)
E7EX29 (43)
E9PFP8 (43)
G8JLB6 (43)
H0Y5C6 (43)
H0Y5F3 (43)
H0YM50 (43)
H7BZ94 (43)
H7C144 (43)
I3L3D5 (43)
I3L4N8 (43)

ENSEMBL ID

ENSG00000170477 (42)
ENSG00000229353 (19)
ENSG00000147251 (14)
ENSG00000247315 (11)
ENSG00000204131 (8)
ENSG00000214897 (3)
ENSG00000176092 (2)

CHEBI ID

CHEBI:18012 (5)
CHEBI:15428 (5)
CHEBI:16668 (4)
CHEBI:28300 (4)
CHEBI:22660 (4)
CHEBI:22653 (4)
CHEBI:26986 (4)
CHEBI:78320 (4)
CHEBI:27570 (4)
CHEBI:17234 (4)
CHEBI:16449 (4)
CHEBI:27266 (4)
CHEBI:24898 (4)
CHEBI:18237 (4)
CHEBI:17822 (4)
CHEBI:17268 (4)
CHEBI:16811 (4)
CHEBI:15741 (4)
CHEBI:30769 (4)
CHEBI:16027 (4)
CHEBI:16010 (3)
CHEBI:17084 (3)
CHEBI:32816 (3)
CHEBI:25017 (3)
CHEBI:16919 (3)
CHEBI:17553 (3)
CHEBI:16761 (3)
CHEBI:15891 (3)
CHEBI:17368 (3)
CHEBI:6650 (3)

Metabolite Name

Glucose (4)
Glutathione (4)
Choline (4)
Fumarate (4)
Succinate (4)
Thiamine (3)
Histidine (3)
Adenosine monophosphate (3)
Glutamine (3)
Threonine (3)
Histamine (3)
Taurine (3)
Betaine (3)
Creatinine (3)
L-Threonine (3)
L-Isoleucine (3)
Glycine (3)
Guanosine (3)
Hypoxanthine (3)
Citrate (3)
Adenosine (3)
Blood group a trisaccharide (2)
6-phospho-d-gluconate (2)
5'-hydroxymethyl-5'-desmethylmeloxicam (2)
1,2-dipalmitoyl-sn-glycero-3-phospho-(1'-myo-inositol) (2)
D-turanose (2)
3'-.alpha.-sialyl-n-acetyllactosamine (2)
L-glutathione, reduced (2)
(2r,3s,4s,5r,6r)-6-[1,7-bis(4-hydroxyphenyl)heptan-3-yloxy]-5-[(2s,3r,4r)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy-2-(hydroxymethyl)oxane-3,4-diol (2)
2'-Deoxyadenosine 5'-monophosphate (dAMP) (2)

First Public Date

2025 (59)
2024 (56)
2014 (53)
2026 (49)
2021 (48)
2023 (43)
2022 (40)
2020 (33)
2015 (29)
2018 (21)
2017 (19)
2019 (14)
2013 (14)
2016 (7)
2012 (1)
2011 (1)

Classification

bacteria (1)

Study status

Completed (18)
Enrolling by invitation (2)
Terminated (2)
Recruiting (2)
Active, not recruiting (1)
Not yet recruiting (1)

Study type

Transcription profiling by array (1651)
RNA-seq of coding RNA (195)
Comparative genomic hybridization by array (161)
ChIP-seq (88)
Methylation profiling by array (85)
Unknown experiment type (68)
ChIP-chip by tiling array (43)
Genotyping by array (39)
Methylation profiling by high throughput sequencing (28)
RNA-seq of non coding RNA (27)
MicroRNA profiling by array (24)
RNA-seq of coding RNA from single cells (24)
Other (21)
DNA-seq (20)
Transcription profiling by tiling array (10)
RNA-seq of total RNA (10)
Human - High-throughput sequencing (9)
Transcription profiling by RT-PCR (9)
ChIP-chip by array (8)
RNAi profiling by array (7)
Cell line - One-color microarray (5)
ATAC-seq (5)
Animal - One-color microarray (4)
Animal - High-throughput sequencing (4)
Cell line - High-throughput sequencing (3)
Spatial transcriptomics by high-throughput sequencing (3)
Proteomic profiling by array (3)
MicroRNA profiling by high-throughput sequencing (2)
High-throughput sequencing (2)
Genotyping by high throughput sequencing (2)

Release Date

2023 (818)
2022 (788)
2021 (751)
2025 (701)
2020 (653)
2024 (631)
2015 (589)
2014 (578)
2016 (508)
2019 (503)
2018 (500)
2013 (486)
2012 (415)
2017 (403)
2010 (403)
2011 (343)
2008 (204)
2009 (169)
2026 (122)
2007 (79)
2005 (42)
2006 (31)
2004 (18)
2003 (6)
2002 (6)
2001 (2)
1999 (2)
1998 (1)
1997 (1)

Lab affiliation

Department of Structural Biology and Developmental Neurobiology, Center for Proteomics and Metabolomics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (3)
Department of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (2)
Head of Laboratory of Neuro-Oncology, Neurology, Clinical & Cancer Proteomics (2)
Laboratory of Bioenergetics Institute of Physiology, Czech Academy of Sciences Prague Czech Republic (2)
1. Cancer Signalling Research Group, School of Biomedical Sciences and Pharmacy, College of Health, Medicine and Wellbeing, University of Newcastle, Callaghan, NSW, AUSTRALIA 2. Precision Medicine Research Program, Hunter Medical Research Institute, New Lambton Heights, NSW, AUSTRALIA 3. Paediatric Program, Mark Hughes Foundation Centre for Brain Cancer Research, College of Health, Medicine, and Wellbeing, Callaghan, NSW, AUSTRALIA (1)
Assistant Professor in Pathology Group Leader at Systems Biology Ireland & Conway FellowUCDSchool of Medicine, University College Dublin (1)
Center for Cancer and Immunology Research, Children’s Research Institute, Children’s National Health System (1)
Center for Childhood Cancer Research Children's Hospital of Philadelphia Department of Pathology and Laboratory Medicine University of Pennsylvania (1)
Children's Hospital of Philadelphia (1)
Children's Hospital of Philadelphia Division of Oncology and Center for Childhood Cancer Research USA (1)
Children’s Hospital, University Medical Center Würzburg, Germany (1)
Department of Pediatrics, Division of Pediatric Hematology/Oncology and Biological Chemistry, University of Michigan Medical School, Ann Arbor, MI 48109, USA (1)
Head of the Curie Institute Mass Spectrometry Platform (1)
Head of the Department, Proteomics Core (1)
Head of the Department, Proteomics Core Facility (1)
IRCCS Ist. G. Gaslini (1)
Imperial College London, Faculty of Medicine, Department of Surgery & Cancer (1)
Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing 100193, China. (1)
Institute of Genetics and Cancer The University of Edinburgh Western General Hospital Crewe Road South Edinburgh EH4 2XU (1)
Institute of Molecular and Cellular Biology, Department of Life Science, National Taiwan University, Taipei, Taiwan (1)
Ist. G. Gaslini (1)
Karoliniska Institutet, Department of Oncology-Pathology (1)
Karolinska Institutet, Department of Oncology-Pathology, Stockholm, Sweden. (1)
Lab head's proteomics and metabolomics program basic research 57357 (1)
Laboratori Institut Josep Carreras (IJC) Ala Sud, Sector 2, Planta 4 Facultat de Medicina Universitat de Barcelona C. Casanova 143 08036 Barcelona (1)
Laboratory of Cellular Biophysics, The Rockefeller University, 1230 York Avenue, New York, NY 10065 USA (1)
Leibniz Institute on Aging Fritz Lipmann Institute (FLI) Beutenbergstr. 11 07745 Jena, Germany (1)
Leibniz-Institut fur Analytische Wissenschaften - ISAS - e.V. (1)
Mass Spectrometry and Proteomics facility (LSMP) Institut Curie PSL Research University FRANCE (1)
Professor, Institute of Biomedicine, University of Gothenburg, Gothenburg, Sweden (1)

Location

United States (23)
Italy (4)
Canada (3)
Germany (2)
Denmark (1)
Sweden (1)

Keyword

Fludarabine (7)
Fludarabine phosphate (7)
Mycophenolic Acid (6)
Cyclosporine (6)
Cyclosporins (6)
Cyclophosphamide (4)
Busulfan (3)
Antibodies (3)
Antibodies, Monoclonal (3)
Recurrent childhood large cell lymphoma (2)
Tacrolimus (2)
Recurrent childhood small noncleaved cell lymphoma (2)
Recurrent/refractory childhood Hodgkin lymphoma (2)
Small intestine lymphoma (2)
Recurrent cutaneous T-cell non-Hodgkin lymphoma (2)
Recurrent mycosis fungoides/Sezary syndrome (2)
Etoposide (2)
Etoposide phosphate (2)
Intraocular lymphoma (2)
Recurrent childhood lymphoblastic lymphoma (2)
Antineoplastic Agents, Immunological (2)
Immunoglobulins (2)
Imetelstat (1)
Childhood pineal parenchymal tumor (1)
Recurrent childhood central nervous system embryonal tumor (1)
Childhood central nervous system choriocarcinoma (1)
Childhood central nervous system germ cell tumor (1)
Childhood central nervous system germinoma (1)
Childhood central nervous system mixed germ cell tumor (1)
Childhood central nervous system teratoma (1)

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Educational attainment in survivors of childhood cancer in Denmark, Finland, and Sweden.

Not available

S-EPMC10803319 | biostudies-literature

Employment status and occupational level of adult survivors of childhood cancer in Great Britain: The British childhood cancer survivor study.

Not available

S-EPMC5434894 | biostudies-literature

The International Cancer Genome project: Pan-Cancer Analysis of Whole Genomes (PCAWG)

The Pan-Cancer Analysis of Whole Genomes (PCAWG) study is an international collaboration to identify common patterns of mutation in more than 2,800 cancer whole genomes from the International Cancer Genome Consortium. Building upon previous work which examined cancer coding regions, this project is ...

ORGANISM(S): Homo sapiens

2020-02-05 | E-MTAB-5200 | biostudies-arrayexpress

The International Cancer Genome project: Pan-Cancer Analysis of Whole Genomes (PCAWG)- Alternative view by individual

ORGANISM(S): Homo sapiens

2020-02-05 | E-MTAB-5423 | biostudies-arrayexpress

Transcription profiling of human diagnostic samples from children with NCI high risk B-precursor ALL treated on the protocol COG 1961 to investigate early response and outcome in high-risk childhood acute lymphoblastic leukemia

The cure rate for childhood ALL has improved considerably in part because therapy is routinely tailored to the predicted risk of relapse. Various clinical and laboratory variables are used in current risk-stratification schemes, but many children who fail therapy lack adverse prognostic factors at i...

ORGANISM(S): Homo sapiens

2008-06-15 | E-GEOD-7440 | biostudies-arrayexpress

Assisted reproductive technology and association with childhood cancer subtypes.

Not available

S-EPMC9939138 | biostudies-literature

Childhood Cancer Survivor Study (CCSS)

PRJNA378576 | ENA

Long-Term Risk of Hospitalization for Somatic Diseases Among Survivors of Childhood Acute Lymphoblastic Leukemia.

Not available

S-EPMC9049267 | biostudies-literature

Chronic health conditions after childhood Langerhans cell histiocytosis: Results from the Swiss Childhood Cancer Survivor Study.

Not available

S-EPMC12283886 | biostudies-literature

Integration of high-resolution methylome and transcriptome analyses to dissect epigenomic changes in childhood acute lymphoblastic leukemia

B-cell precursor acute lymphoblastic leukemia (pre-B ALL) is the most common pediatric cancer. Although the genetic origin of the disease remains unclear, epigenetic modifications including DNA methylation are suggested to contribute significantly to leukemogenesis. We assessed the DNA methylation s...

ORGANISM(S): Homo sapiens

2013-06-04 | E-GEOD-38235 | biostudies-arrayexpress

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11125 Results

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