Chimera - OmicsDI

Show results for

Unknown (2334)
Transcriptomics (820)
Genomics (566)
Proteomics (142)
Metabolomics (37)
Other (20)
Methylation profiling (3)

Organisms

Mus musculus (328)
Homo sapiens (310)
Arabidopsis thaliana (66)
Zea mays (31)
Saccharomyces cerevisiae (31)
Drosophila melanogaster (13)
Rattus norvegicus (10)
Populus trichocarpa x Populus deltoides (8)
Oryza sativa (8)
Solanum lycopersicum (8)
Biomphalaria glabrata (7)
Trypanosoma brucei (7)
Bos taurus (7)
Gallus gallus (7)
Caenorhabditis elegans (7)
Epinephelus fuscoguttatus x Epinephelus lanceolatus (6)
Dictyostelium discoideum (6)
Sus scrofa (5)
Populus x canadensis (4)
Schizosaccharomyces pombe (4)
Vitis vinifera (4)
Salmo salar (4)
Populus tremula x Populus alba (4)
Picea engelmannii x Picea glauca (3)
Populus tremula x Populus tremuloides (3)
Bacillus subtilis (3)
Ovis aries (3)
Candida albicans (3)
Saccharomyces bayanus x Saccharomyces cerevisiae (2)
Picea sitchensis (2)

Organisms

Mus musculus (155)
Homo sapiens (101)
Escherichia coli (5)
coral metagenome (4)
Arabidopsis thaliana (4)
Ananas comosus var. bracteatus (3)
Dictyostelium discoideum (3)
human metagenome (3)
Rattus norvegicus (3)
soil metagenome (3)
Salmonella enterica subsp. enterica serovar Heidelberg (2)
feces metagenome (2)
Danio rerio (2)
Bacillus subtilis BEST7003 (1)
Bacillus subtilis BEST7613 (1)
Methanogenium sp. (1)
Chlorella sp. MEM25 (1)
Aedes albopictus (1)
Citrus x limon (1)
human viral metagenome (1)
macroalgae metagenome (1)
Solanum chacoense (1)
Neurospora crassa (1)
Xenopus laevis (1)
compost metagenome (1)
Chlorocebus sabaeus (1)
Drosophila melanogaster (1)
Fragaria vesca (1)
Caenorhabditis elegans (1)
Severe acute respiratory syndrome coronavirus 2 (1)

Repository

biostudies-arrayexpress (721)
ENA (413)
geo (217)
pride (96)
EGA (61)
MetaboLights (37)
MassIVE (18)
iProX (15)
jPOST (13)

Tissue

Cell culture (20)
Epithelial cell (9)
Brain (4)
T cell (4)
Blood (4)
Cell suspension culture (3)
Whole body (3)
Root (2)
Hepatocyte (2)
Colon (2)
Regulation of gastric acid secretion (1)
Lung epithelial cell differentiation (1)
Cytotoxic T-lymphocyte (1)
Long bone (1)
Wound fluid (1)
Head and neck squamous cell carcinoma cell line (1)
Endosperm (1)
Head and neck squamous cell carcinoma cell (1)
Plant (1)
Bronchial epithelial cell (1)
Motor neuron (1)
A549-CR cell (1)
Milk (1)
Regulatory T cell (1)
Urine (1)
Muscle (1)
Plant cell (1)
Prokaryotic cell (1)
Myeloid cell (1)
Blood plasma (1)

Disease

Normal (3)
Disease free (3)
Osteoblastoma (2)
Influenza (2)
Acute leukemia (2)
T. circumcincta infection (1)
Mock infected (1)
Mastitis (1)
Renal cell carcinoma (1)
NA (1)
Chicken Anaemia Virus infected (1)
Lung cancer (1)
Immunoglobulin light chain amyloidosis (1)
Stomach cancer (1)
Bone marrow (1)
Diffuse gastric cancer (1)
Human cytomegalovirus infection (1)
Prostate adenocarcinoma (1)
Multiple myeloma (1)
Cervix carcinoma (1)
Pancreatic cancer (1)
Parkinson's disease (1)
Pertussis (1)
COVID-19 (1)
Rheumatoid arthritis (1)
Breast cancer (1)
Colon cancer (1)

Technology Type

Mass Spectrometry (96)
Shotgun proteomics (35)
Mass spectrometry (25)
Bottom-up proteomics (23)
Data-dependent acquisition (19)
Chemical cross-linking coupled with mass spectrometry proteomics (13)
Affinity purification coupled with mass spectrometry proteomics (10)
Mass spectrometry assay (7)
Gel-based experiment (7)
NMR spectroscopy assay (4)
HDMSE (4)
Top-down proteomics (4)
Illumina HiSeq 2000 (2)
MSE (2)
SWATH MS (2)
Illumina HiSeq 2000, ILLUMINA (1)
Illumina Genome Analyzer II (1)
NMR spectroscopy (1)
Affinity proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (24)
Illumina HiSeq 2000 (24)
NextSeq 500 (19)
NextSeq 2000 (14)
HiSeq X Ten (9)
Illumina NovaSeq X (8)
NextSeq 550 (7)
Illumina HiSeq 2500 (6)
ScanArray 5000 [PerkinElmer] (5)
Illumina HiSeq 4000 (5)
PromethION (4)
Illumina MiSeq (4)
Illumina HiSeq 3000 (4)
Illumina Genome Analyzer IIx (3)
DNBSEQ-G400 (3)
Element AVITI (2)
Sony SH800 (2)
AB SOLiD 4 System (2)
Illumina Genome Analyzer II (2)
None (2)
NA (2)
MinION (2)
BGISEQ-500 (2)
Agilent TapeStation (1)
Coulter Automated Workstation Biomek i7 Hybrid (1)
RNeasy 96-well plate kit (1)
Lab equipment (1)
All materials grown under field condition; no hardware involved (1)
Bucket and liquid N (1)
NextSeq 500, 75 bp single end lane (1)

Publication Date

2025 (108)
2014 (95)
2013 (81)
2011 (77)
2012 (76)
2026 (74)
2024 (72)
2010 (71)
2015 (66)
2008 (54)
2022 (49)
2021 (46)
2023 (45)
2016 (39)
2020 (38)
2009 (31)
2019 (22)
2018 (21)
2007 (17)
2017 (9)
2006 (8)
2005 (5)
2003 (1)

CHEBI ID

CHEBI:28300 (7)
CHEBI:16958 (7)
CHEBI:30769 (7)
CHEBI:18237 (6)
CHEBI:28757 (6)
CHEBI:6650 (6)
CHEBI:17992 (5)
CHEBI:17234 (5)
CHEBI:17533 (5)
CHEBI:18300 (5)
CHEBI:18012 (5)
CHEBI:24266 (4)
CHEBI:15799 (4)
CHEBI:33508 (4)
CHEBI:17256 (4)
CHEBI:26271 (4)
CHEBI:16040 (4)
CHEBI:22660 (4)
CHEBI:16811 (4)
CHEBI:16708 (4)
CHEBI:24898 (4)
CHEBI:15428 (4)
CHEBI:17268 (4)
CHEBI:28044 (4)
CHEBI:16566 (4)
CHEBI:17568 (4)
CHEBI:15940 (4)
CHEBI:27266 (4)
CHEBI:7916 (4)
CHEBI:16467 (4)

Metabolite Name

Citric acid (8)
Malic acid (6)
Adenosine (6)
Azelaic acid (6)
Adenine (6)
Sucrose (6)
Uracil (5)
Pyridoxine (5)
Pantothenic acid (5)
Sebacic acid (5)
Urocanic acid (5)
Guanine (5)
Malonic acid (5)
Glutaric acid (5)
Glutamine (5)
Cytidine (5)
Guanosine (5)
Uridine (5)
Creatinine (5)
Creatine (5)
L-Tyrosine (5)
L-Phenylalanine (5)
Hypoxanthine (5)
S-Adenosylmethionine (4)
Trans-Ferulic acid (4)
Erucamide (4)
Trigonelline (4)
Betaine (4)
Pyroglutamic acid (4)
1-Aminocyclopropanecarboxylic acid (4)

First Public Date

2025 (65)
2024 (61)
2026 (47)
2014 (43)
2021 (42)
2023 (31)
2022 (31)
2020 (27)
2019 (18)
2017 (14)
2018 (13)
2013 (9)
2015 (8)
2016 (3)
2012 (1)

Classification

bacteria (8)
protozoa (3)
viruses (1)

Modification

4'-dihydroxyphenylalanine (1)
4-tetrahydrothiazine-3-carboxylic acid (1)

Study type

Transcription profiling by array (382)
RNA-seq of coding RNA (133)
RNA-seq of coding RNA from single cells (29)
ChIP-seq (25)
Comparative genomic hybridization by array (24)
DNA-seq (21)
RNA-seq of non coding RNA (18)
Other (15)
ChIP-chip by tiling array (11)
Unknown experiment type (10)
Methylation profiling by high throughput sequencing (8)
Genotyping by array (5)
Transcription profiling by tiling array (4)
RNA-seq of total RNA (4)
Methylation profiling by array (3)
High-throughput sequencing (2)
RNAi profiling by array (2)
ChIP-chip by array (2)
Exome sequencing (2)
RIP-seq (2)
Genotyping by high throughput sequencing (2)
CUT&Tag (1)
GRO-seq (1)
Transcription profiling by SAGE (1)
Differential (1)
Animal - Single-cell sequencing (1)
Plant - High-throughput sequencing (1)
Cell line - One-color microarray (1)
Plant - One-color microarray (1)
Animal - High-throughput sequencing (1)

Release Date

2025 (231)
2022 (214)
2023 (200)
2024 (187)
2021 (184)
2015 (168)
2020 (166)
2014 (165)
2012 (156)
2013 (152)
2011 (146)
2016 (143)
2019 (136)
2018 (130)
2010 (114)
2017 (109)
2008 (96)
2009 (86)
2026 (68)
2007 (42)
2006 (37)
2005 (30)
2003 (20)
2002 (18)
2004 (12)
2001 (11)
1998 (11)
2000 (10)
1999 (9)
1997 (4)

Lab affiliation

Proteomics, Max Planck Institute of Biophysics, Frankfurt am Main, Germany (2)
Department of Plant Systems Biology, University of Hohenheim, 70599 Stuttgart, Germany (2)
Division of Cell Signalling and Immunology, School of Life Sciences, University of Dundee, Dundee, DD1 5EH, Scotland, United Kingdom (2)
Yale Cancer Biology Institute (2)
Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (2)
Department of Bioactive and Functional Food Chemistry, Institute of Applied Biosciences, Karlsruhe Institute of Technology (KIT), Karlsruhe, Germany (1)
Pfizer, INC. (1)
NMPA Key Laboratory for Research and Evaluation of Drug Metabolism & Guangdong Provincial Key Laboratory of New Drug Screening & Guangdong-Hongkong-Macao Joint Laboratory for New Drug Screening, School of Pharmaceutical Sciences, Southern Medical University,Guangzhou 510515, P.R.China (1)
Max Planck Institute for Multidisciplinary Sciences, Bioanalytical Mass Spectrometry Group, Am Fassberg 11, 37077 Göttingen, Germany University Medical Center Goettingen, Institute for Clinical Chemistry, Bioanalytics, Robert-Koch-Strasse 40, 37075 Göttingen, Germany (1)
Buchmann Institute for Molecular Life Sciences, Pharmaceutical Chemistry, Goethe-University Frankfurt am Main,Max-von-Laue-Strasse 15. R. 3.652, D-60438 Frankfurt amMain, Germany (1)
Université de Strasbourg, CNRS, Génétique Moléculaire, Génomique, Microbiologie (GMGM), UMR7156, 67000 Strasbourg, France (1)
structural proteomics unit, national facility for structural biology, Human Technopole, Italy (1)
Discovery Proteomics, Genentech (1)
Rudolf-Virchow-Zentrum Center for Integrative and Translational Bioimaging Universität Würzburg (1)
Mass Spectrometry Laboratory IBB PAS (1)
1 Department of Biochemistry and Biophysics, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC 27599, USA. 2 Department of Pharmacology and Cancer Biology, Duke University School of Medicine, Durham, NC 27710, USA 3 Duke Cancer Institute, Duke University School of Medicine, Durham, NC 27710, USA 4 Department of Pathology, Duke University School of Medicine, Durham, NC 27710, USA (1)
Group Leader. Laboratorio de Neurobiologia Molecular y Celular. Institutto de Investigaciones Biotecnologicas (IIBio) Consejo de Investigaciones Cientificas y Tecnicas (CONICET) Universidad Nacional de San Martin (UNSAM) (1)
Microbiology Department at the Icahn School of Medicine at Mount Sinai (1)
Developmental and Cell Biology University of California, Irvine Irvine, California, USA (1)
Max Planck Institute for Biophysical Chemistry, 37077 Göttingen, Germany Institute of Clinical Chemistry, University Medical Center Göttingen, 37075 Göttingen, Germany (1)
Gregor Mendel Institute, Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria. (1)
Price Lab, Chemistry and Biochemistry, Brigham Young University, United States of America (1)
Food Chemistry, Department of Chemistry and Pharmacy, Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU) (1)
Laboratory of Cell and Developmental Signaling, National Cancer Institute, National Institutes of Health, Frederick, MD 21702, USA (1)
Leibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP)Berlin (1)
Mass spectrometry (1)
Clemens Schöpf Institute, Department of Chemistry, Technical University of Darmstadt, Peter-Grünberg-Straße 4, 64287 Darmstadt, Germany (1)
Amgen Inc. (1)
Department of Chemistry and Biochemistry Montana State University (1)
Department of hematology, UMCG (1)

Previous page
1 / 393
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 393
Next page

Sort by:

Relevance

Page size

Tumor-specific retargeting of an oncogenic transcription factor chimera results in dysregulation of chromatin and transcription

Using EWS-FLI and its parental transcription factor, FLI1, we created a unique experimental system to address questions regarding the genomic mechanisms by which chimeric transcription factors cause cancer. We found that in tumor cells, EWS-FLI targets regions of the genome distinct from FLI1, despi...

ORGANISM(S): Homo sapiens

2011-11-09 | E-GEOD-31838 | biostudies-arrayexpress

Enhancing UCSF Chimera through web services.

Not available

S-EPMC4086125 | biostudies-literature

The smallest chimera state for coupled pendula.

Not available

S-EPMC5054381 | biostudies-literature

Tools for integrated sequence-structure analysis with UCSF Chimera.

Not available

S-EPMC1570152 | biostudies-literature

Chimera states in uncoupled neurons induced by a multilayer structure.

Not available

S-EPMC5153648 | biostudies-literature

Hippocampal phase precession may be generated by chimera dynamics.

Not available

S-EPMC12536035 | biostudies-literature

Chimera: enabling hierarchy based multi-objective optimization for self-driving laboratories.

Not available

S-EPMC6182568 | biostudies-literature

MYB87 chimera repressor suppresses longitudinal organ growth with aberrant expressions of cell wall related genes in Arabidopsis thaliana

Proper cell wall regulation is essential for growth and development in plants. Here we report that the constitutive expression of MYB87 chimera repressor causes the suppressed longitudinal organ elongation in almost all organs. Aberrant transversal growth is also observed in multiple organs which co...

ORGANISM(S): Arabidopsis thaliana

2014-03-05 | E-GEOD-51595 | biostudies-arrayexpress

Generation of an adenovirus-parvovirus chimera with enhanced oncolytic potential.

Not available

S-EPMC3457320 | biostudies-literature

Ethical arguments concerning human-animal chimera research: a systematic review.

Not available

S-EPMC7092670 | biostudies-literature

Previous page
1 / 393
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 393
Next page

Sort by:

Relevance

Page size

3925 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

CHEBI ID

Metabolite Name

First Public Date

Classification

Modification

Study type

Release Date

Lab affiliation

Tags

OmicsDI is part of the ELIXIR infrastructure

Tweets