Chromosome centric human proteome project (c-hpp)

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Proteomics (223)
Multiomics (79)
Unknown (15)
Other (2)

Organisms

Homo sapiens (191)

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PeptideAtlas (123)
pride (67)
MassIVE (32)
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jPOST (1)

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Disease free (1)
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Technology Type

Mass Spectrometry (67)
Shotgun proteomics (48)
Bottom-up proteomics (16)
Gel-based experiment (5)
SRM/MRM (3)
Affinity purification coupled with mass spectrometry proteomics (2)
All-ion fragmentation (1)
Data-independent acquisition (1)

Instrument Platform

LTQ Orbitrap Velos (71)
LTQ Orbitrap Elite (49)
TripleTOF 5600 (14)
LTQ Orbitrap (13)
MS:1000031 (4)
MS:1000044 (3)
MS:1000419 (3)
Q Exactive (3)
Instrument (2)
Orbitrap Fusion Lumos (2)
Q Exactive HF (2)
6520A Quadrupole Time-of-Flight LC/MS (1)
Orbitrap Fusion (1)
6520 Triple Quadrupole LC/MS (1)
LTQ Orbitrap XL (1)

Publication Date

2014 (84)
2015 (41)
2013 (27)
2019 (23)
2018 (12)
2016 (11)
2017 (8)
2020 (7)
2022 (5)
2021 (3)
2025 (1)
2023 (1)

UNIPROT ID/AC

B3KML9 (123)
B4E3A4 (123)
I3L4N8 (123)
P07437 (123)
P07900 (123)
P08238 (123)
P0DMV8 (123)
P11021 (123)
P11142 (123)
P34931 (123)
P60709 (123)
P62736 (123)
P63261 (123)
P63267 (123)
P68032 (123)
P68133 (123)
P68363 (123)
P68366 (123)
P68371 (123)
Q00610 (123)
Q00610-2 (123)
Q05639 (123)
Q13707 (123)
Q13748 (123)
Q13885 (123)
Q14974 (123)
Q58FF8 (123)
Q6PEY2 (123)
Q71U36 (123)
Q9BQE3 (123)

ENSEMBL ID

ENSG00000170477 (116)
ENSG00000229353 (56)
ENSG00000147251 (44)
ENSG00000247315 (34)
ENSG00000204131 (10)
ENSG00000214897 (3)
ENSG00000176092 (2)

Modification

4-tetrahydrothiazine-3-carboxylic acid (2)
4x(2)H labeled dimethylated residue (2)
4x(15)N labeled L-arginine (1)
N6-dimethyl-L-lysine (1)

Release Date

2014 (4)
2017 (2)
2015 (2)
2013 (2)
2025 (1)
2024 (1)
2020 (1)
2018 (1)
2016 (1)

Lab affiliation

Proteomics - Bioinformatics (5)
Professor and Director Center of Proteomic Analysis BGI-Shenzhen (4)
Beijing proteome research center (3)
Centre for Blood Research, Department of Oral Biological and Medical Sciences, University of British Columbia, Vancouver, BC, Canada (2)
Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, College of Life Science and 9 Technology, Jinan University, Guangzhou 510632, China (2)
Ludwig-Maximiliam-University of Munich (2)
Ping Xu, Ph.D. Secretary General of CNHUPO Professor, Director Department of Genomics and Proteomics, State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences (Beijing) Beijing Institute of Lifeomics， 38 Life Science Park Road, Beijing 102206, P.R. China. Tel: 0086-10-61777113, Fax: 0086-10-61777060 (2)
Proteome Research Center (2)
Seoul National University (2)
State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Engineering Research Center for Protein Drugs, National Center for Protein Sciences, Beijing Institute of Radiation Medicine, Beijing 102206, China (2)
Antwerp University (1)
BGI-Genomics and Department of BGI education, School of Life Sciences, University of Chinese Academy of Science, China (1)
BGI-shenzhen (1)
Biomedical Omics Research, Korea Basic Science Institute, Cheongju, Korea (1)
CNRS UMR5089 Institut de Pharmacologie et de Biologie Structurale Université de Toulouse Laboratoire de Spectrométrie de Masse BioOrganique (LSMBO), IPHC, Université de Strasbourg CEA, DSV, iRTSV, Laboratoire de Biologie à Grande Echelle, INSERM U1038, Université de Grenoble (1)
CSIC/UAB Proteomics Facility. IIBB-CSIC, IDIBAPS. Barcelona, Spain. (1)
Center of Genomics Sciences/National Autonomous University of Mexico (1)
Centre for Blood Research (1)
Dep. Biochemistry, Institute of Chemistry, Federal University of Rio de Janeiro (1)
Department of Applied Chemistry, Kyung Hee University, Yongin, Korea (1)
Department of Medicine and General Cytometry Service-Nucleus, Cancer Research Centre (CSIC/USAL/IBSAL). Avda. Universidad de Coimbra, S/N, 37007 Salamanca, Spain. Phone: +34 923294811 Fax: +34 923294743 (1)
Department of Pharmacology and Toxicology (1)
Department of proteomics and mass spectrometry, laboratory of systems biology, Institute of biomedical chemistry, Moscow, Russia. (1)
Dept. of Pharmacology and Toxicology Univ. of TX Medical Branch Galveston, TX 77555 (1)
Federal University of Rio de Janeiro (1)
Fudan University (1)
IBMC (1)
Institute of Biomedical Chemistry laboratory of microsomal oxidation (1)
Institute of Biomedical Chemistry of Russian Academy of Medical Sciences, Pogodinskaya 10, Moscow, 119121, Russia (1)
Institute of Life and Health Engineering Assistant Director, Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes Jinan University (1)

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Update on virtual-experimental 2DE approach in chromosome-centric human proteome project

In the boundaries of chromosome-centric Human Proteome Project c-HPP to obtain information about proteoforms coded by chromosome 18, several cell lines were analyzed. In our study we have been using proteoform separation by 2DE (sectional analysis) and semi-virtual 2DE with following shotgun mass-sp...

ORGANISM(S): Homo sapiens (Human)

2018-09-24 | PXD010142 | Pride

The human proteome project, C-HPP 18 chromosome project

The Russian part of C-HPP is aimed to identify proteins encoded by the 18 human chromosome. In this project, 3 liver tissue samples were studied by standart Shotgun and 2 dimensional liquid chromatography approach to enhance the sensitivity of the MS method. The total amount of proteins found in sam...

ORGANISM(S): Homo sapiens (Human)

2022-05-20 | PXD026997 | Pride

Human liver tissue Human proteome project C-hpp

Human spermatozoa as a model for detecting missing proteins in the context of the chromosome-centric Human Proteome Project.

Data from ProteomeXchange, PXD ID: PXD002367. File: Mitchell_40_F03_exclu02.mzml. Published as part of J Proteome Res. 2015 . From the Abstract: {{i}} The chromosome-centric Human Proteome Project (C-HPP) aims at cataloguing the proteins as gene products encoded by the human genome, in a chromosome...

ORGANISM(S): Homo_sapiens_viruses, Human

GPM32320016359 | GPMDB

Resource Reanalysis

Update on virtual-experimental 2DE approach in chromosome-centric human proteome project

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2020-11-12 | MSV000086448 | MassIVE

Proteomic and phosphoproteomic data of colorectal cancer tissues and cells for Chromosome-Centric Human Proteome Project

Protein extraction and proteolytic digestion were performed using a Filter-Assisted Sample Preparation (FASP) protocol. In case of phosphopeptide enrichment immobilized Fe(III) affinity chromatography (Fe-IMAC) was performed. The peptides were fractionated using an HPLC system fitted with an SCX col...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2016-03-15 | MSV000079583 | MassIVE

Chr16-HPP.Pilot experiment.JPR HPP Special issue

"The Chromosome 16 Consortium is integrated in the Human Proteome Project that aims to develop an entire map of the proteins encoded by the human genome following a gene-centric strategy (C-HPP) to make progress in the understanding of human biology in health and disease (B/D-HPP). To characterize t...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2019-06-12 | MSV000083968 | MassIVE

Identification of missing proteins defined by chromosome-centric proteome project in the cytoplasmic detergent-insoluble proteins

Data from ProteomeXchange, PXD ID: PXD001694. File: lungSILAC_first_14.mzml. Published as part of J Proteome Res. 2015 Jun 25 . From the Abstract: {{i}} ... As most samples prepared and analyzed in the C-HPP framework were focusing on detergent soluble proteins, we posit that as a natural compositi...

ORGANISM(S): Homo_sapiens_viruses, Human

GPM32320016148 | GPMDB

Resource Reanalysis

The human spermatozoa proteome

The human spermatozoa proteome was in depth characterized using shotgun iterative GeLC-MS/MS method with peptide exclusion lists.

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2018-06-26 | MSV000082508 | MassIVE

Proteome of the Human Corpus Callosum

Characterization of the human Anterior Temporal Lobe and Corpus Callosum: C-HPP

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2019-06-10 | MSV000083947 | MassIVE

A chromosome-centric human proteome project (C-HPP) to characterize the sets of proteins encoded in chromosome 17.

Not available

S-EPMC4142220 | biostudies-literature

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240 Results

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