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ProteomicsNanosenors containing nonstandard amino acids
High resolution mass spectrometry is used to confirm conjugation of fluorogenic nonstandard amino acids onto an intermediate molecule, and further verify site-specific ribosomal incorporation into different positions of a polypeptide.
ORGANISM(S): Escherichia coli 
2024-10-17 | PXD053593 | Pride
Nonstandard amino acids Fluorogenic 
ProteomicsSwapped genetic code block viral infections and gene transfer
Removing cellular transfer RNAs (tRNAs), making their cognate codons unreadable, creates a genetic firewall that prevents viral replication and horizontal gene transfer. However, numerous viruses and mobile genetic elements encode parts of the translational apparatus, including tRNAs, potentially re...
ORGANISM(S): Escherichia Coli (ncbitaxon:562) 
2022-07-08 | MSV000089854 | MassIVE
TranscriptomicsComparative gene expression profiling of human PGP1 iPS, lymphocyte, donor fibroblasts
Human iPS cell line, immortalized B-cells, and primary fibroblasts frome Personal Genome Project voluteer 1 Each sample per cell type.
ORGANISM(S): Homo sapiens 
2014-03-04 | E-GEOD-54733 | biostudies-arrayexpress
TranscriptomicsRNA sequencing reveals differential expression of mitochondrial and oxidation reduction genes in the long-lived naked mole-rat when compared to mice.
The goal was to find genes which are differentially expressed between the naked mole-rat (Heterocephalus glaber) and the wild-type mice liver tissue. The genes which are most differentially expressed may provide a clue for the remarkable differences between naked mole-rat and mouse in terms of longe...
ORGANISM(S): Heterocephalus glaber 
2011-11-07 | E-GEOD-30764 | biostudies-arrayexpress
UnknownPulmonary matrix-derived hydrogels from patients with idiopathic pulmonary fibrosis induce a proinflammatory state in lung fibroblasts in vitro.
Not available
S-EPMC11321034 | biostudies-literature
UnknownGlobal Gene Expression Analysis in an in vitro Fibroblast Model of Idiopathic Pulmonary Fibrosis Reveals Potential Role for CXCL14/CXCR4.
Not available
S-EPMC5838110 | biostudies-literature
TranscriptomicsTranscription profiling of IPS cells derived from peripheral blood cells: Reprogramming of T Cells from Human Peripheral Blood
Human induced pluripotent stem (iPS) cells derived from somatic cells of patients hold great promise for modelling human diseases. Dermal fibroblasts are frequently used for reprogramming, but require an invasive skin biopsy and a prolonged period of expansion in cell culture prior to use. Here, we ...
ORGANISM(S): Homo sapiens 
2010-06-23 | E-GEOD-22167 | biostudies-arrayexpress
UnknownInactivation of porcine endogenous retrovirus in pigs using CRISPR-Cas9.
Not available
S-EPMC5813284 | biostudies-literature
UnknownInsights into the evolution of longevity from the bowhead whale genome.
Not available
S-EPMC4536333 | biostudies-literature
UnknownEvolthon: A community endeavor to evolve lab evolution.
Not available
S-EPMC6440615 | biostudies-literature
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