Clpb - OmicsDI

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Unknown (212)
Transcriptomics (35)
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Organisms

Streptomyces coelicolor (5)
Escherichia coli (5)
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Psychrobacter arcticus 273-4 (2)
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Escherichia coli (2)
Mus musculus (2)
Psychrobacter arcticus 273-4 (1)
Tropheryma whipplei (1)
Campylobacter lari (1)
Streptomyces coelicolor A3(2) (1)
Caulobacter vibrioides NA1000 (1)
Caulobacter vibrioides (1)
Campylobacter coli (1)
Enterococcus faecalis (1)
Exiguobacterium indicum (1)
Mycobacterium tuberculosis (1)
Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 (1)
Listeria monocytogenes (1)
Chlamydomonas reinhardtii (1)
Malus domestica (1)
Arabidopsis thaliana (1)
Staphylococcus aureus (1)
Homo sapiens (1)

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pride (31)
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Technology Type

Mass Spectrometry (31)
Shotgun proteomics (14)
HDMSE (7)
Affinity purification coupled with mass spectrometry proteomics (6)
Bottom-up proteomics (5)
MSE (4)
Gel-based experiment (4)
Top-down proteomics (1)
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Orbitrap Exploris 480 (1)

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2009 (11)
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2014 (8)
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2020 (2)
2019 (2)
2021 (1)
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2016 (1)
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Classification

bacteria (8)

Study type

Transcription profiling by array (15)
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RNA-seq of coding RNA (1)

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2022 (21)
2021 (20)
2019 (17)
2025 (16)
2017 (15)
2015 (14)
2009 (14)
2010 (11)
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1999 (3)
1998 (3)
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2000 (1)

Lab affiliation

First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China (3)
5Department of Biotechnology, Graduate School of Engineering, Osaka University (1)
Transplantation Laboratory, Faculty of Medicine, University of Helsinki, Helsinki, Finland and HUSLAB, Helsinki University Hospital, Helsinki, Finland (1)
Transplantation Laboratory, University of Helsinki & HUSLAB, Helsinki University Hospital, Helsinki, Finland. (1)
Transplantation Laboratory, Haartman Institute, University of Helsinki, Finland (1)
Department of Otorhinolaryngology - Head and Neck Surgery, University of Helsinki and Helsinki University Hospital, Helsinki, Finland (1)
Department of Biochemistry and Pharmacology and The Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Parkville, Victoria, 3052, Australia (1)
Academy of Finland Postdoctoral Researcher EV Core and Research Faculty of Pharmacy, Division of Pharmaceutical Biosciences Viikinkaari 9 00014 University of Helsinki, Finland (1)
Centre for Proteomic Research, Biological Sciences, University of Southampton (1)
nstitute of Biochemistry and Molecular Biology (IBMB), Faculty of Medicine, University of Bonn, Nussallee 11, 53115 Bonn, Germany (1)
Institute of Biochemistry and Molecular Biology (IBMB), Faculty of Medicine, University of Bonn, Nussallee 11, 53115 Bonn, Germany (1)
TU Munich, Chair of Organic Chemistry II, Center for Protein Assemblies, Ernst-Otto-Fischer-Str. 8 85748 Garching (1)
Institute of Medical Microbiology, Virology and Hygiene, Schillingallee 70, 18057 Rostock, Germany (1)
Transplantation laboratory, Univeristy of Helsinki and Helsinki Univeristy Central Hospital (1)
Cornell University, Plant Biology section (1)
School of Integrative Plant Science Plant Biology Section Cornell University (1)
Department of Cellular Biochemistry, Max Planck Institute of Biochemistry, Am Klopferspitz 18, 82152 Martinsried, Germany (1)
Department of Pediatrics, Dr. von Hauner Children’s Hospital and Gene Center, Ludwig-Maximilians-Universität München, Munich, Germany (1)
Proteomics and Metabonomics Laboratory,Experimental Neuroscience Department, IRCCS-S.Lucia Foundation, Roma , Italy (1)
NIBRT Characterisation and Comparability Laboratory, National Institute for Bioprocessing, Research and Training, Fosters Avenue, Mount Merrion, Blackrock, Co. Dublin, A94 X099, Ireland (1)
Department of Otorhinolaryngology – Head and Neck Surgery, University of Helsinki and Helsinki University Hospital, Helsinki 00130, Finland and Department of Biosciences and Nutrition, Karolinska Institutet, Stockholm 11382, Sweden (1)
Max-Planck Institute of Biochemistry, Department of Cellular Biochemistry (1)
VIB-KU Leuven Center for Brain & Disease Research, 3000 Leuven, Belgium (1)
Transplantation laboratory, Haartmaninkatu 3, PO Box 21, FI-00014 University of Helsinki, Finland (1)
Departmental Faculty of Medicine, UniCamillus-Saint Camillus International University of Health and Medical Sciences, 00131 Rome, Italy (1)
Transplantation laboratory and HUSLAB, Haartman Insititute, Univeristy of Helsinki, Finland (1)
Neuroproteomics Group Department of Molecular Neurobiology Max Planck Institute for Multidisciplinary Sciences Hermann-Rein-Str. 3 37075 Goettingen Germany (1)
Institute of Molecular Systems Biology, Department of Biology, ETH Zurich, Zurich, Switzerland (1)
Department of Biological Sciences, Ohio University (1)

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Native mass spectrometry of ClpB

The ATP-dependent bacterial protein disaggregation machine, ClpB belonging to the AAA+ superfamily, refolds toxic protein aggregates into the native state in cooperation with the cognate Hsp70 partner. The ring-shaped hexamers of ClpB unfold and thread its protein substrate through the central pore....

ORGANISM(S): Escherichia coli

2018-10-18 | PXD009732 | Pride

Native mass spectrometry Clpb

Mutant Analysis Reveals Allosteric Regulation of ClpB Disaggregase.

Not available

S-EPMC5319980 | biostudies-literature

Hsp90, DnaK, and ClpB collaborate in protein reactivation.

Not available

S-EPMC11804706 | biostudies-literature

Substrate Discrimination by ClpB and Hsp104.

Not available

S-EPMC5447042 | biostudies-literature

Yersinia enterocolitica ClpB affects levels of invasin and motility.

Not available

S-EPMC111002 | biostudies-literature

CLPB disaggregase dysfunction impacts the functional integrity of the proteolytic SPY complex

CLPB is a mitochondrial intermembrane space AAA+ domain–containing disaggregase. CLPB mutations are associated with 3-methylglutaconic aciduria and neutropenia; however, the molecular mechanism underscoring disease and the contribution of CLPB substrates to disease pathology remains unknown. Interac...

ORGANISM(S): Homo sapiens (Human)

2024-01-18 | PXD042313 | Pride

Disaggregase Protein transport Mitochondria Protein quality control Mitochondrial disease

Neuronal mitochondrial disaggregase CLPB ameliorates Huntington's disease pathology in mice.

Not available

S-EPMC12712926 | biostudies-literature

Interplay between E. coli DnaK, ClpB and GrpE during protein disaggregation.

Not available

S-EPMC4297517 | biostudies-literature

Escherichia coli ClpB is a non-processive polypeptide translocase.

Not available

S-EPMC4692069 | biostudies-literature