Coates L L - OmicsDI

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Unknown (496)
Transcriptomics (19)
Proteomics (12)
Metabolomics (4)
Genomics (3)

Organisms

Homo sapiens (15)
Mus musculus (4)
Arabidopsis thaliana (3)
Nicotiana tabacum (2)
Caenorhabditis elegans (2)
Bacteria (1)
Folsomia candida (1)
uncultured bacterium (1)
Oryza sativa Indica Group (1)
Clostridium acetobutylicum (1)
Oncorhynchus mykiss (1)
Vibrio cholerae O1 biovar El Tor str. N16961 (1)
Vibrio phage ICP1_2006_E (1)

Repository

biostudies-arrayexpress (22)
pride (12)
MetaboLights (4)

Tissue

Cell culture (4)
B cell (1)
Lymph node (1)
Rosette (1)
Spleen (1)

Disease

Acute leukemia (1)
Breast cancer (1)

Technology Type

Mass Spectrometry (12)
Shotgun proteomics (6)
Mass spectrometry (4)
Bottom-up proteomics (4)
Affinity purification coupled with mass spectrometry proteomics (2)
Data-dependent acquisition (1)

Instrument Platform

Illumina HiSeq 4000 (3)
Liquid Chromatography MS - negative - reverse phase (3)
Liquid Chromatography MS - positive - reverse phase (3)
Illumina HiSeq 2500 (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2025 (5)
2012 (4)
2017 (3)
2013 (3)
2026 (3)
2024 (3)
2023 (2)
2015 (2)
2009 (2)
2007 (2)
2021 (1)
2016 (1)
2014 (1)
2011 (1)
2010 (1)
2008 (1)
2022 (1)
2019 (1)
2018 (1)

CHEBI ID

CHEBI:15354 (1)
CHEBI:15355 (1)
CHEBI:16822 (1)
CHEBI:16919 (1)
CHEBI:17126 (1)
CHEBI:17750 (1)
CHEBI:18132 (1)
CHEBI:18295 (1)
CHEBI:194557 (1)
CHEBI:194559 (1)
CHEBI:194572 (1)
CHEBI:194573 (1)
CHEBI:194574 (1)
CHEBI:194575 (1)
CHEBI:194576 (1)
CHEBI:194577 (1)
CHEBI:194578 (1)
CHEBI:194579 (1)
CHEBI:195168 (1)
CHEBI:195169 (1)
CHEBI:195170 (1)
CHEBI:28790 (1)
CHEBI:73026 (1)
CHEBI:82392 (1)

Metabolite Name

(2alpha,3alpha,5alpha,22R,23R)-2,3,22,23-Tetrahydroxy-25-methylergost-24(28)en-6-one (2)
(beta-1-O-[N-(2-formyl-3-chlorophenyl)anthraniloyl]-D-glucupyranuronic acid) (2)
1-(4-O-beta-D-glucopyranosyl-3-methoxyphenyl)-3,5-dihydroxydecane (2)
1-O-Caffeoyl-beta-D-glucose (2)
12,13-DHOME (2)
12-Hydroxyjasmonic acid glucoside (2)
12-hydroxyheptadecanoic acid (2)
17-Hydroxypregnenolone 3-sulfate (2)
2-(2-Chlorophenyl)-2-(6,7-dihydro-4H-thieno[3,2-c]pyridin-5-yl)propanedioic acid (2)
20-Hydroxy-6Z,15Z-eicosadienoic acid (2)
4-Chloro-3-ethoxy-7-guanidinoisocoumarin (2)
5-(Biotinamido)pentylamine (2)
5-Deoxyribose-1-phosphate (2)
5-Hydroxypyrazine-2-carboxylic acid (2)
5-Isoxazoleacetic acid, 4,5-dihydro-3-(4-hydroxyphenyl)-, methyl ester (2)
5-Methyleriodictyol 7-[glucosyl-(1->4)-galactoside] (2)
5-Phenyl-1,3-oxazinane-2,4-dione (2)
5-[(Aminooxy)sulfonyl]-2,4-dichlorobenzoic acid (2)
6-Caffeoylsucrose (2)
7-Epi-12-hydroxyjasmonic acid (2)
7-Hydroxy-4-(trifluoromethyl)coumarin (2)
8-Hydroxypinoresinol 4-glucoside (2)
Acetylcholine (2)
Agar (2)
Allantoin (2)
Anthranilic acid (2)
Apimaysin (2)
Arbutin (2)
Argatroban (2)
Arsenobetaine (2)

Study type

Transcription profiling by array (10)
RNA-seq of coding RNA (4)
Other (2)
ChIP-seq (2)
Bisulfite-seq (1)
Comparative genomic hybridization by array (1)
Methylation profiling by array (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2022 (62)
2024 (54)
2021 (49)
2023 (42)
2020 (38)
2015 (34)
2025 (34)
2019 (33)
2016 (31)
2018 (28)
2017 (26)
2014 (19)
2011 (19)
2013 (11)
2012 (9)
2010 (8)
2009 (8)
2008 (3)
2007 (3)
2026 (2)
2006 (2)
2003 (1)
2000 (1)
1998 (1)

Lab affiliation

Functional Proteomics, ICR (2)
Institute of Molecular Biology (IMB), Mainz, Germany (2)
Department of Plant and Microbial Biology, University of California, Berkeley, Berkeley, CA, 94720, USA (1)
Division of Rheumatology, Departments of Medicine and Microbiology, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, USA (1)
Masaryk Memorial Cancer Institute, Zluty kopec, Brno, Czech Republic (1)
Professor Anthony W Purcell Deputy Head (Research), Department of Biochemistry and Molecular Biology Head Immunoproteomics Laboratory Monash University, Clayton Campus Clayton 3800 Victoria Australia (1)
Protein Maturation, Cell fate and Therapeutics, Institute for Integrative Biology of the Cell (I2BC), CNRS UMR9198, Batiment 21, 1 Avenue de la Terrasse F-91198 Gif-sur-Yvette CEDEX, France (1)
RECAMO, Masaryk Memorial Cancer Institute Zluty Kopec, Brno, Czech Republic (1)
Recamo, Masaryk Memorial Cancer Institute, Zluty kopec 7, Brno, 656 53 Czech Republic (1)
Saarland University, Medical Biochemistry & Molecular Biology, Center for Molecular Signaling, PZMS, Kirrberger Straße 100, 66421 Homburg (Saar), Germany (1)

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Effect of food sources of nitrate, polyphenols, L-arginine and L-citrulline on endurance exercise performance: a systematic review and meta-analysis of randomised controlled trials.

Not available

S-EPMC8715640 | biostudies-literature

Transcription profiling of A. thaliana Arabidillo-1 and -2 knock outs vs. wildtype

Arabidopsis has two genes, Arabidillo-1 and -2, related to animal Armadillo/ beta-catenin (Coates, 2003). Armadillo/beta-catenin directly activates the expression of developmental and cell proliferation genes, and also independently regulates cell-cell adhesion. Arabidillo proteins are nuclear and ...

ORGANISM(S): Arabidopsis thaliana

2007-04-17 | E-NASC-74 | biostudies-arrayexpress

Preclinical Characterization of PC786, an Inhaled Small-Molecule Respiratory Syncytial Virus L Protein Polymerase Inhibitor.

Not available

S-EPMC5571287 | biostudies-literature

Uptake of Recommended Vaccines During Pregnancy Among Publicly and Privately Insured People in the United States, December 2020-September 2022.

Not available

S-EPMC11845822 | biostudies-literature

Transcription profiling by array of mouse macrophage cell cultures from C57BL/6 or CBA/Ca strains after exposure to 4 Gy irradiation

Macrophages were produced from bone marrow cell suspensions from the femurs of five C57BL/6 or CBA/Ca mice by culture for 7 days in modified Eagles medium supplemented with 25% pre-tested horse serum and 25% pre-tested conditioned medium from the L929 cell line as a source of CSF-1. For each experim...

ORGANISM(S): Mus musculus

2007-12-01 | E-MEXP-1291 | biostudies-arrayexpress

ACVIM consensus statement on diagnosis and management of urinary incontinence in dogs.

Not available

S-EPMC10937496 | biostudies-literature

A Prader-Willi locus lncRNA cloud modulates diurnal genes and energy expenditure.

Prader-Willi syndrome (PWS), a genetic cause of childhood obesity, is characterized by intellectual disabilities and sleep abnormalities. PWS-causing deletions include a neuronal long, non-coding RNA (lncRNA) processed into small nucleolar RNAs and a spliced lncRNA,116HG. We show that 116HG forms a ...

ORGANISM(S): Mus musculus

2013-06-20 | E-GEOD-43575 | biostudies-arrayexpress

Transcription profiling of Nicotiana tabacum grown in different light conditions to test the reproducibility of a custom Affymetrix microarray for tobacco

A study was carried out to compare gene expression levels between technical replicate samples in order to test the reproducibility of a custom Affymetrix microarray for Tobacco (Nicotiana tabacum).

ORGANISM(S): Nicotiana tabacum

2009-01-01 | E-MTAB-72 | biostudies-arrayexpress

Vitamin D supplementation decreases serum 27-hydroxycholesterol in a pilot breast cancer trial.

Not available

S-EPMC6381934 | biostudies-literature

Transcription profiling of Arabidopsis wild type, arabidillo-1/2 mutant and Arabidillo-1 overexpressing lines to identify targets of Arabidillo

ORGANISM(S): Arabidopsis thaliana

2008-06-15 | E-GEOD-6826 | biostudies-arrayexpress