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TranscriptomicsTranscript Profiling of the Aerobic and Anoxic Rice Coleoptile
Rice (Oryza sativa L.) seeds can germinate in complete absence of oxygen. Under anoxia, the rice coleoptile elongates, reaching a length greater than that of the aerobic one. In this series, we compare the transcriptome of rice coleoptiles grown under aerobic and anaerobic conditions. Lasanthi-Kudah...
ORGANISM(S): Oryza sativa 
2007-03-19 | GSE6908 | GEO
TranscriptomicsTranscriptome profiles of the rice coleoptile of wild type and reduced adh activity (rad) mutant
Normally, rice can elongate the coleoptile under submerged condition. However, reduced adh activity (rad) mutant cannot elongate the coleoptile under submergence. To investigate the change in gene expression, we performed microarray analysis. In this analysis, we used 1 day old seedling of rice. But...
ORGANISM(S): Oryza sativa Japonica Group 
2011-04-07 | GSE26632 | GEO
TranscriptomicsTranscriptome profiles of the rice coleoptile of wild type and reduced adh activity (rad) mutant
Normally, rice can elongate the coleoptile under submerged condition. However, reduced adh activity (rad) mutant cannot elongate the coleoptile under submergence. To investigate the change in gene expression, we performed microarray analysis. In this analysis, we used 1 day old seedling of rice. B...
ORGANISM(S): Oryza sativa Japonica Group 
2011-04-07 | E-GEOD-26632 | biostudies-arrayexpress
GenomicsIntegrated transcriptomics and miRNAomics provide insights into the regulatory networks associated with coleoptile senescence in rice.
Purpose: To understand the miRNAome changes during coleoptile senescence, small RNA libraries were constructed from control and senescence tissues and subjected to Illumina sequencing. Methods: Rice seeds were surface sterilized and submerged for seven days in sterile water. The seeds with coleoptil...
ORGANISM(S): Oryza sativa 
2022-07-21 | GSE199238 | GEO
GenomicsIntegrated transcriptomics and miRNAomics provide insights into the regulatory networks associated with coleoptile senescence in rice.
Integrated transcriptomics and miRNAomics provide insights into the regulatory networks associated with coleoptile senescence in rice.
PRJNA819015 | ENA
TranscriptomicsIntegrated transcriptomics and miRNAomics provide insights into the regulatory networks associated with coleoptile senescence in rice
Purpose: To understand the transcriptional changes during coleoptile senescence, transcriptome libraries were constructed from control and senescence tissues and subjected to Illumina sequencing. Methods: Rice seeds were surface sterilized and submerged for seven days in sterile water. The seeds wit...
ORGANISM(S): Oryza sativa 
2022-07-21 | GSE199139 | GEO
GenomicsIntegrated transcriptomics and miRNAomics provide insights into the regulatory networks associated with coleoptile senescence in rice
Integrated transcriptomics and miRNAomics provide insights into the regulatory networks associated with coleoptile senescence in rice
PRJNA818631 | ENA
UnknownGenome-wide association study of coleoptile length with Shanxi wheat.
Not available
S-EPMC9532578 | biostudies-literature
UnknownGenome wide association study and transcriptome analysis identify candidate genes regulating wheat coleoptile length.
Not available
S-EPMC11561208 | biostudies-literature
UnknownWheat seedling emergence from deep planting depths and its relationship with coleoptile length.
Not available
S-EPMC3760894 | biostudies-literature
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