Colonoscopy - OmicsDI

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Unknown (2728)
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Other (2)

Organisms

Homo sapiens (109)
Mus musculus (4)
unidentified (1)
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gut metagenome (1)
synthetic construct (1)
human gut metagenome (1)

Organisms

Homo sapiens (78)
human gut metagenome (17)
Mus musculus (5)
human metagenome (4)
gut metagenome (3)
metagenome (2)
feces metagenome (2)

Repository

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geo (42)
pride (21)
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Tissue

Colon (11)
Epithelial cell (6)
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Disease

Colorectal Neoplasms (356)
Adenoma (61)
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Neoplasms (23)
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Polyps (15)
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Pancreatic Neoplasms (3)
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Cancer-Bowel-Back passage (rectum) or large bowel (colon) (2)
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Normal (1)

Technology Type

Mass Spectrometry (22)
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SWATH MS (4)
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Mass spectrometry assay (2)
Mass spectrometry (1)
ESI (1)
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Gel-based experiment (1)
Top-down proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (7)
Illumina HiSeq 4000 (3)
N/A (2)
Illumina HiSeq 2500 (2)
Q Exactive (2)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
MACS (1)
10x Genomics Chromium (1)
NA (1)
10x Genomics Chromium Controller (1)
DNBSEQ-G400 (1)
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LTQ Orbitrap Velos (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

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2018 (15)
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2010 (12)
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2014 (7)
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2019 (5)
2016 (5)
2021 (4)
2020 (4)
2015 (4)
2013 (4)
2009 (2)
2012 (1)
2011 (1)
2007 (1)
2008 (1)

CHEBI ID

CHEBI:116314 (1)
CHEBI:125678 (1)
CHEBI:133086 (1)
CHEBI:133530 (1)
CHEBI:133624 (1)
CHEBI:133683 (1)
CHEBI:134277 (1)
CHEBI:137197 (1)
CHEBI:137230 (1)
CHEBI:137717 (1)
CHEBI:137777 (1)
CHEBI:137852 (1)
CHEBI:137853 (1)
CHEBI:137921 (1)
CHEBI:138422 (1)
CHEBI:138781 (1)
CHEBI:140473 (1)
CHEBI:142245 (1)
CHEBI:142528 (1)
CHEBI:14314 (1)
CHEBI:143245 (1)
CHEBI:144843 (1)
CHEBI:145864 (1)
CHEBI:145961 (1)
CHEBI:15318 (1)
CHEBI:15344 (1)
CHEBI:15521 (1)
CHEBI:15532 (1)
CHEBI:156149 (1)
CHEBI:15625 (1)

Metabolite Name

1,5-Anhydrosorbitol (2)
17-Hydroxyprogesterone (2)
3,4',5-Biphenyltriol (2)
8-Hydroxyadenine (2)
Acetaminophen (2)
Adenosine (2)
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Berberrubine (2)
Betaine (2)
Bilirubin (2)
Butenylcarnitine (2)
Capsaicin (2)
Cytidine (2)
D-Ornithine (2)
Dihydrouracil (2)
Estradiol (2)
Eudesmic acid (2)
Glycyl-Tryptophan (2)
Guanine (2)
Harman (2)
Indole (2)
L-Arginine (2)
L-Threonine (2)
Leu-Leu-Leu (2)
Linoleoyl ethanolamide (2)
Maltitol (2)
Melezitose (2)
Mesalazine (2)
Methylmalonic acid (2)

First Public Date

2024 (25)
2025 (19)
2023 (19)
2022 (19)
2019 (16)
2014 (16)
2018 (13)
2026 (12)
2017 (12)
2020 (9)
2021 (8)
2016 (5)
2015 (5)
2013 (2)

Study status

Completed (364)
Recruiting (143)
Not provided (84)
Not yet recruiting (75)
Active, not recruiting (38)
Terminated (25)
Withdrawn (13)
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Study type

Interventional (522)
Observational (206)
Transcription profiling by array (22)
Other (17)
Observational patient registry (13)
Methylation profiling by array (6)
RNA-seq of coding RNA from single cells (5)
Bisulfite-seq (3)
RNA-seq of coding RNA (3)
Exome sequencing (2)
Human - High-throughput sequencing (1)
Comparative genomic hybridization by array (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (337)
2022 (334)
2023 (319)
2024 (286)
2021 (280)
2020 (220)
2019 (196)
2018 (152)
2017 (122)
2016 (96)
2014 (93)
2015 (91)
2026 (65)
2013 (47)
2012 (41)
2010 (29)
2011 (28)
2009 (16)
2007 (4)
2005 (4)
2008 (3)
2006 (3)
2003 (3)
2004 (2)
2001 (1)

Lab affiliation

1. Graduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, Taoyuan 33302, Taiwan. 2. Molecular Medicine Research Center, Chang Gung University, Taoyuan 33302, Taiwan. 3. Department of Otolaryngology-Head and Neck Surgery, Chang Gung Memorial Hospital, Linkou 33305, Taiwan. 4. Research Center for Food and Cosmetic Safety, College of Human Ecology, Chang Gung University of Science and Technology, Taoyuan 33302, Taiwan. (1)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (1)
Biosciences and bioengineering Department, IIT Bombay (1)
Chair, Dept of Biochemistry, Microbiology and Immunology, University of Ottawa, Ottawa, Canada (1)
Computational Biology Division, Department of Integrative Biomedical Sciences, University of Cape Town, Cape Town, South Africa. (1)
Department of Medical Biochemistry, University of Gothenburg (1)
Department of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany. & NNF Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark (1)
Department of biochemistry, microbiology and immunology, Faculty of Medicine, University of Ottawa (1)
FMSS, Département d'immunologie et de biologie cellulaire, Université de Sherbrooke, Canada (1)
INSERM IRSD U1220 CHU PURPAN PLACE DU DOCTEUR BAYLAC CS 60039 31024 TOULOUSE CEDEX 3 FRANCE (1)
Inserm, U1068, CRCM, Marseille Protéomique, Marseille, France (1)
Institute of Molecular Cancer Research, University of Zurich, Switzerland (1)
Laboratory of Intestinal Physiopathology, Department of Immunology and Cell Biology, Faculty of Medicine and Health Sciences, Université de Sherbrooke, Sherbrooke, QC, Canada (1)
Laboratory of Intestinal Physiopathology, Department of Immunology and Cell Biology, Faculty of Medicine and Health Sciences, Université de Sherbrooke, Sherbrooke, QC, J1H 5N4, Canada (1)
Medicine and Pharmacy Research Center, Binzhou Medical University (1)
Ottawa Institute of Systems Biology and Department of Biochemistry, Microbiology and Immunology, University of Ottawa, Ottawa, Canada (1)
Ottawa Institute of Systems Biology and Department of Biochemistry, Microbiology and Immunology, University of Ottawa, Ottawa, Canada. (1)
Professor and Deputy Director Center for Systems Biology and Molecular Medicine, Yenepoya Research Centre, Yenepoya (Deemed to be University), Deralakatte, Mangalore, India (1)
Professor and Deputy Director Center for Systems Biology, Yenepoya Research Centre, Yenepoya (Deemed to be University) (1)
Rheumatology Department, Affiliated Hospital of Nanjing University of Chinese Medicine, Nanjing, China (1)
The University of NSW, Australia (1)

Location

United States (188)
China (68)
United Kingdom (51)
Australia (46)
Italy (42)
Netherlands (41)
Spain (41)
Germany (40)
Japan (36)
Canada (34)
France (34)
Denmark (20)
Poland (16)
South Korea (15)
Hong Kong (13)
Taiwan (11)
Belgium (10)
Czechia (10)
Israel (10)
Thailand (10)
Iran (9)
Norway (9)
Switzerland (6)
Brazil (5)
New Zealand (5)
Portugal (5)
Singapore (4)
Sweden (4)
Ecuador (3)
Greece (3)

Keyword

Colonoscopy (182)
Screening (47)
Colorectal cancer screening (28)
Adenoma detection rate (22)
Screening colonoscopy (12)
Polypectomy (11)
Bowel preparation (10)
Colorectal Cancer Screening (10)
Adenoma (9)
Artificial Intelligence (9)
FIT (9)
Fecal immunochemical test (9)
Artificial intelligence (8)
CRC (8)
Cancer screening (8)
Chromoendoscopy (8)
Cancer Screening (7)
Endoscopy (7)
Prevention (7)
Surveillance (7)
Adenoma Detection Rate (6)
Adenomas (6)
Colorectal neoplasm (6)
Colorectal polyps (6)
Mass screening (6)
Polyps (6)
Sigmoidoscopy (6)
Adenoma detection (5)
Endocuff (5)
Fecal occult blood test (5)

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Multispecies probiotics after colonoscopy

Application of multispecies probiotics reduces gastro-intestinal discomfort and increases microbial diversity after colonoscopy

PRJEB56238 | ENA

Molecular Colonoscopy (MOCO)

PRJNA1499426 | ENA

Interpretation and adherence to the updated risk-stratified guideline for colonoscopy surveillance after polypectomy - a nationwide survey.

Not available

S-EPMC7508656 | biostudies-literature

Transcription profiles of rectal biopsies obtained during diagnostic colonoscopy for pediatric inflammatory bowel diseases.

PRJNA483949 | ENA

Gut Microbiota Dynamics after Colonoscopy

PRJNA827030 | ENA

Risk for Metachronous Advanced Neoplasia in Patients With a Modified Definition of Advanced Adenoma: Data From the New Hampshire Colonoscopy Registry.

Not available

S-EPMC12724626 | biostudies-literature

Colonoscopy Findings in FIT+ and mt-sDNA+ Patients versus in Colonoscopy-only Patients: New Hampshire Colonoscopy Registry Data.

Not available

S-EPMC9662869 | biostudies-literature

Transcription profiles of rectal biopsies obtained during diagnostic colonoscopy for pediatric inflammatory bowel diseases.

RNA was isolated from rectal biopsies from 190 pediatric patients undergoing diagnostic colonoscopy for inflammatory bowel diseases, including Crohn's disease and ulcerative colitis. Single-end, 75-bp sequencing was performed, and raw reads aligned to the human genome using Gencode v 24 as reference...

ORGANISM(S): Homo sapiens

2018-11-27 | GSE117993 | GEO

Information experiences, needs, and preferences of colonoscopy patients: A pre-colonoscopy survey.

Not available

S-EPMC6531243 | biostudies-literature

Guidelines for accreditation of endoscopy units: quality measures from the Korean Society of Coloproctology.

Not available

S-EPMC7943281 | biostudies-literature

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3799 Results

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