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TranscriptomicsFinding new Chimeric RNAs in RNA-seq data, a test study in Acute Myeloid Leukemia patient cells
In this strudy, we seek out new chimeric RNA in RNA-seq data from acute myeloid leukemia (AML) patient cells as new biomarkers to improve diagnosis and prognosis in cancer. Total RNA were extracted from bone marrow or peripheral blood mononuclear cells in three AML patients. polyA+ cDNAs were sequen...
ORGANISM(S): Homo sapiens 
2017-06-28 | E-MTAB-5767 | biostudies-arrayexpress
UnknownGene Expression Signature Associated with Clinical Outcome in ALK-Positive Anaplastic Large Cell Lymphoma.
Not available
S-EPMC8582782 | biostudies-literature
TranscriptomicsTranscriptome analysis of monocytic leukemia cell differentiation
The human leukemia cell line U937 is a well-established model for studying monocytic cell differentiation. We used a modified protocol (SADE) of serial analysis of gene expression (SAGE) and developed a SADE linker-anchored PCR assay to investigate the pattern of expression of known genes and to ide...
ORGANISM(S): Homo sapiens 
2004-10-23 | E-GEOD-1865 | biostudies-arrayexpress
UnknownDevelopment of gene expression-based risk score in cytogenetically normal acute myeloid leukemia patients.
Not available
S-EPMC3478459 | biostudies-literature
UnknownIdentification of a 20-gene expression-based risk score as a predictor of clinical outcome in chronic lymphocytic leukemia patients.
Not available
S-EPMC4026849 | biostudies-literature
UnknownUsing reads to annotate the genome: influence of length, background distribution, and sequence errors on prediction capacity.
Not available
S-EPMC2731892 | biostudies-literature
UnknownOn the evaluation of the fidelity of supervised classifiers in the prediction of chimeric RNAs.
Not available
S-EPMC5090896 | biostudies-literature
UnknownNew chimeric RNAs in acute myeloid leukemia.
Not available
S-EPMC5861515 | biostudies-literature
TranscriptomicsSimultaneous gene expression profiling in human macrophages infected with Leishmania major parasites using SAGE
Leishmania (L) are intracellular protozoan parasites which are able to survive and replicate within the harsh and potentially hostile phago-lysosomal environment of mammalian mononuclear phagocytes. A complex interplay then takes place between the macrophage (MM-NM-&) striving to eliminate the patho...
ORGANISM(S): Leishmania major 
2008-05-21 | E-GEOD-10442 | biostudies-arrayexpress
UnknownDifferential long non-coding RNA expression profiles in human oocytes and cumulus cells.
Not available
S-EPMC5797088 | biostudies-literature
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