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Unknown
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Transcriptomics
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Genomics
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Proteomics
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Models
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Other
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Organisms
Homo sapiens
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Mus musculus
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Allexis
(8)
Arabidopsis thaliana
(8)
Callinectes sapidus
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Danio rerio
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Drosophila
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Drosophila melanogaster
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Entamoeba histolytica
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Entamoeba histolytica HM-1:IMSS-A
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Escherichia coli
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Homo sapiens
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Leishmania major strain Friedlin
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Medicago truncatula
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Meleagris gallopavo
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Organisms
Homo sapiens
(19)
Mus musculus
(6)
Campylobacter jejuni
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Repository
biostudies-arrayexpress
(73)
ENA
(41)
geo
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pride
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MetaboLights
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Disease
Disease free
(3)
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Cancer
(1)
Technology Type
Mass Spectrometry
(8)
Mass spectrometry
(3)
Shotgun proteomics
(3)
Gel-based experiment
(2)
Mass spectrometry assay
(1)
Affinity purification coupled with mass spectrometry proteomics
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Chemical cross-linking coupled with mass spectrometry proteomics
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SWATH MS
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Instrument Platform
Illumina HiSeq 2000
(6)
NextSeq 500
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NextSeq 550
(2)
Illumina NovaSeq 6000
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Liquid Chromatography MS - positive - reverse phase
(2)
Liquid Chromatography MS - negative - reverse phase
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Chromium Controller
(1)
GenePix 4200A
(1)
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G2565BA DNA microarray scanner [Agilent]
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NA
(1)
NextSeq 2000
(1)
Gas Chromatography MS - positive
(1)
Liquid Chromatography MS - positive - reverse-phase
(1)
Liquid Chromatography MS - negative - reverse-phase
(1)
Liquid Chromatography MS - negative - hilic
(1)
Liquid Chromatography MS - positive - hilic
(1)
Publication Date
2014
(11)
2010
(10)
2016
(7)
2015
(7)
2013
(7)
2008
(7)
2026
(6)
2022
(5)
2017
(5)
2009
(5)
2024
(4)
2012
(4)
2025
(3)
2020
(3)
2011
(3)
2023
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2019
(2)
2021
(1)
2018
(1)
2007
(1)
2006
(1)
UNIPROT ID/AC
F1LV89
(1)
F1M9C3
(1)
Q63787
(1)
Q62636
(1)
Q9QYV3
(1)
P47196
(1)
P47197
(1)
P63086
(1)
P21708
(1)
P36506
(1)
Q01986
(1)
P11345
(1)
P50904
(1)
Q9Z1I2
(1)
Q63531
(1)
Q9Z1I1
(1)
Q63484
(1)
Q9QX70
(1)
P07522
(1)
CHEBI ID
CHEBI:6650
(2)
CHEBI:220610
(1)
CHEBI:46755
(1)
CHEBI:181428
(1)
CHEBI:181501
(1)
CHEBI:182838
(1)
CHEBI:181445
(1)
CHEBI:181836
(1)
CHEBI:133298
(1)
CHEBI:72868
(1)
CHEBI:189140
(1)
CHEBI:61553
(1)
CHEBI:73806
(1)
CHEBI:191000
(1)
CHEBI:192273
(1)
CHEBI:41231
(1)
CHEBI:192276
(1)
CHEBI:27825
(1)
CHEBI:192275
(1)
CHEBI:192274
(1)
CHEBI:34459
(1)
CHEBI:192272
(1)
CHEBI:28334
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CHEBI:33999
(1)
CHEBI:64492
(1)
CHEBI:61392
(1)
CHEBI:73765
(1)
CHEBI:83101
(1)
CHEBI:191135
(1)
CHEBI:73762
(1)
Metabolite Name
Trihydroxy octadecenoic acid (TriHOME isomer II)
(1)
Trihydroxy octadecenoic acid (TriHOME isomer I)
(1)
Trihydroxy octadecadienoic acid (TriHODE isomer II)
(1)
Dihydroxy eicosatetraenoic acid (DiHETE)
(1)
Trihydroxy octadecadienoic acid (TriHODE isomer I)
(1)
Alpha-Tomatine
(1)
Acetyl tryptophan
(1)
Feruloyl serotonin
(1)
Indole acrylic acid
(1)
Caffeoyl putrescine
(1)
2-(2,6-Diaminohexanoylamino)-3-methylbutanoic acid
(1)
[D-Asp3]MC-LR
(1)
Microcystin LY
(1)
N-gamma-Glutamylmethionine
(1)
N-acetyl-?-D-mannosamine
(1)
Alanylphenylalanine
(1)
N-(Carboxymethyl)-3-(dodecanoylamino)-N,N-dimethylpropan-1-aminium
(1)
2-Amino-6-propanoylpteridin-4(1H)-one
(1)
15-benzyl-18-[(1E,3E)-6-methoxy-3,5-dimethyl-7-phenylhepta-1,3-dienyl]-1,5,12,19-tetramethyl-2-methylidene-8-(2-methylpropyl)-3,6,9,13,16,20,25-heptaoxo-1,4,7,10,14,17,21-heptazacyclopentacosane-11,22-dicarboxylic acid
(1)
(NAG)(NAM)-AqmA
(1)
(2R,3S)-2-[[3-(carboxymethylimino)-5-hydroxy-5-(hydroxymethyl)-2-methoxycyclohexen-1-yl]amino]-3-hydroxybutanoic acid
(1)
Colletotric acid
(1)
1-hexadecanoyl-sn-glycerol
(1)
2-[4-(2-Hydroxyethyl)piperazin-4-ium-1-yl]ethanesulfonate
(1)
Microcystin-LR
(1)
Octadecanamide
(1)
Feruloyl tyramine
(1)
D-tryptophan
(1)
Coumaroyl tyramine
(1)
Ala-Met
(1)
First Public Date
2025
(9)
2026
(8)
2024
(6)
2023
(4)
2022
(4)
2014
(4)
2020
(2)
2018
(2)
2021
(1)
2015
(1)
Modelling Approach
Ordinary differential equation model
(1)
Lab affiliation
Breast Cancer Now The Institute of Cancer Research
(2)
Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, 13355 Berlin, Germany
(1)
Children's Medical Research Insitute, The University of Sydney
(1)
Pole of cardiovascular research - Institute of Experimental and Clinical Research (IREC) Université catholique de Louvain Brussels, Belgium
(1)
Politecnico di Torino
(1)
School of Life Sciences, University of Dundee
(1)
Senior Assistant Professor Department of Botany University of Kashmir Hazratbal, Srinagar-190006
(1)
Tags
xref:PubMed:24760698
(3)
pathogen
(2)
pathogen:bacterium
(2)
xref:PubMed:39435593
(1)
xref:PubMed:33072739
(1)
xref:PubMed:39971915
(1)
xref:PubMed:38181751
(1)
xref:PubMed:39350244
(1)
xref:PubMed:41734765
(1)
xref:PubMed:38049901
(1)
xref:PubMed:26173112
(1)
xref:PubMed:36463288
(1)
xref:PubMed:40418627
(1)
xref:PubMed:36167728
(1)
xref:PubMed:35961968
(1)
xref:PubMed:34347907
(1)
xref:PubMed:20023031
(1)
xref:PubMed:36075907
(1)
xref:PubMed:30478291
(1)
xref:PubMed:37674987
(1)
xref:PubMed:30739914
(1)
xref:PubMed:41407538
(1)
xref:PubMed:38748874
(1)
xref:PubMed:41050933
(1)
IsPrivate
False
(1)
Classification
bacteria
(2)
Study type
Transcription profiling by array
(35)
RNA-seq of coding RNA
(10)
ChIP-seq
(8)
Comparative genomic hybridization by array
(5)
Other
(4)
RNA-seq of coding RNA from single cells
(2)
Transcription profiling by SAGE
(1)
Baseline
(1)
ChIP-chip by tiling array
(1)
Plant - High-throughput sequencing
(1)
Transcription profiling by tiling array
(1)
ChIP-chip by array
(1)
DNA-seq
(1)
Methylation profiling by array
(1)
Methylation profiling by high throughput sequencing
(1)
Release Date
2022
(88)
2025
(78)
2019
(67)
2020
(61)
2021
(60)
2023
(54)
2024
(51)
2016
(42)
2018
(41)
2017
(37)
2014
(33)
2015
(30)
2013
(25)
2012
(21)
2010
(20)
2026
(17)
2011
(16)
2009
(16)
2008
(12)
2004
(7)
2006
(4)
2007
(3)
2005
(3)
2002
(2)
2003
(1)
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Connectivity modelling in conservation science: a comparative evaluation.
Not available
S-EPMC9537442
|
biostudies-literature
Cite
3-way networks: application of hypergraphs for modelling increased complexity in comparative genomics.
Not available
S-EPMC4376783
|
biostudies-literature
Cite
Analogue-based approaches in anti-cancer compound modelling: the relevance of QSAR models.
Not available
S-EPMC3279142
|
biostudies-literature
Cite
Exploration of freely available web-interfaces for comparative homology modelling of microbial proteins.
Not available
S-EPMC3766314
|
biostudies-literature
Cite
Reproducibility of PD patient-specific midbrain organoid data for in vitro disease modelling (passages)
Reproducibility of PD patient-specific midbrain organoid data for in vitro disease modelling (passages)
PRJNA1213756
|
ENA
Cite
Visualization of protein sequence space with force-directed graphs, and their application to the choice of target-template pairs for homology modelling.
Not available
S-EPMC7110651
|
biostudies-literature
Cite
From tissue to silicon to plastic: three-dimensional printing in comparative anatomy and physiology.
Not available
S-EPMC4821264
|
biostudies-literature
Cite
Analyzing housing supply location choice: a comparative study of the modelling frameworks.
Not available
S-EPMC10791635
|
biostudies-literature
Cite
Computational approaches to support comparative analysis of multiparametric tests: Modelling versus Training.
Not available
S-EPMC7470374
|
biostudies-literature
Cite
A novel CRISPR activation mouse enables modelling of aggressive lymphoma and interrogation of venetoclax resistance
A novel CRISPR activation mouse enables modelling of aggressive lymphoma and interrogation of venetoclax resistance
PRJNA846166
|
ENA
Cite
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