Compensatory tolerance mechanisms

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Unknown (83)
Proteomics (39)
Transcriptomics (13)
Genomics (11)
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Other (1)

Organisms

Mus musculus (19)
Homo sapiens (9)
Oncorhynchus mykiss (2)
Saccharomyces cerevisiae (2)
Craterostigma plantagineum (2)
Rattus norvegicus (2)
Ambystoma californiense (1)
1720309 (1)
Aspergillus fumigatus (1)
Crunoecia irrorata (1)
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Helicobacter pylori PMSS1 (1)
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Pseudomonas putida KT2440 (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. ATCC 14028 (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (1)
Solea senegalensis (1)

Organisms

Mus musculus (4)
Homo sapiens (2)
Ambystoma californiense (1)
Oncorhynchus mykiss (1)
Saccharomyces cerevisiae (1)

Repository

pride (35)
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geo (9)
biostudies-arrayexpress (4)
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Disease

Cardiovascular system disease (2)
Not Available (1)
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Esophageal adenosquamous carcinoma (1)
Fibrosarcoma (1)
Marfan syndrome (1)
Moyamoya disease (1)
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Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (35)
Shotgun proteomics (17)
Bottom-up proteomics (8)
Data-dependent acquisition (5)
Affinity purification coupled with mass spectrometry proteomics (3)
Data-independent acquisition (2)
Mass spectrometry (1)
Mass spectrometry assay (1)
DiaPASEF (1)
Gel-based experiment (1)
Top-down proteomics (1)

Instrument Platform

Instrument (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography MS - positive - reverse-phase (1)

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2025 (12)
2026 (10)
2015 (9)
2023 (3)
2020 (3)
2022 (3)
2018 (3)
2016 (3)
2021 (2)
2019 (2)
2010 (1)
2006 (1)
2005 (1)
2024 (1)

UNIPROT ID/AC

10116.ENSRNOP00000002498 (2)
10116.ENSRNOP00000003224 (2)
10116.ENSRNOP00000013780 (2)
10116.ENSRNOP00000026719 (2)
10116.ENSRNOP00000034905 (2)
10116.ENSRNOP00000039971 (2)
10116.ENSRNOP00000049080 (2)
10116.ENSRNOP00000050143 (2)
10116.ENSRNOP00000052803 (2)
10116.ENSRNOP00000054637 (2)
10116.ENSRNOP00000061086 (2)
10116.ENSRNOP00000065048 (2)
10116.ENSRNOP00000065507 (2)
10116.ENSRNOP00000066654 (2)
10116.ENSRNOP00000066955 (2)
10116.ENSRNOP00000067711 (2)
1433E_RAT (2)
3HIDH_RAT (2)
6PGL_RAT (2)
9544.ENSMMUP00000000584 (2)
9544.ENSMMUP00000000801 (2)
9544.ENSMMUP00000001594 (2)
9544.ENSMMUP00000001794 (2)
9544.ENSMMUP00000001959 (2)
9544.ENSMMUP00000002322 (2)
9544.ENSMMUP00000002908 (2)
9544.ENSMMUP00000003176 (2)
9544.ENSMMUP00000003379 (2)
9544.ENSMMUP00000003922 (2)
9544.ENSMMUP00000004496 (2)

Metabolite Name

(+)-6-aminopenicillanic acid (1)
(+)-catechin (1)
(+)-fluprostenol (1)
(-)-catechin gallate (1)
(-)-epicatechin (1)
(-)-epigallocatechin (1)
(-)-secoisolariciresinol (1)
(.+/-.)-11-nor-.delta.9-tetrahydrocannabinol-9-carboxylic acid (1)
(1-(5-fluoropentyl)-1h-indazole-3-carbonyl)-l-valine (1)
(1-acetyloxy-3-hydroxy-6,8a-dimethyl-7-oxo-3-propan-2-yl-2,3a,4,8-tetrahydro-1h-azulen-4-yl) 4-hydroxybenzoate (1)
(19r)-9-acetyl-19-hydroxy-10,14-dimethyl-20-oxopentacyclo[11.8.0.0<2,10>.0<4,9 >.0<14,19>]henicos-17-yl acetate (1)
(1r,2e,7r,10e,12s,13s,15r)-12,15-dihydroxy-7-methyl-8-oxabicyclo[11.3.0]hexadeca-2,10-dien-9-one (1)
(1r,3ar,3bs,4ar,6s,7s,7ar,8r,8ar,9ar)-1,4a,8-tris(acetyloxy)-2,2,3b,6,8a-pentamethyl-4,9-dioxo-tetradecahydro-1h-cyclopenta[a]s-indacen-7-yl butanoate (1)
(1r,4s,7r,8s)-7-[(2e,4e)-hexa-2,4-dienoyl]-3-hydroxy-8-[(2s)-3-hydroxy-2,4-dimethyl-5-oxo-2,5-dihydrofuran-2-yl]-5-[(2e,4e)-1-hydroxyhexa-2,4-dien-1-ylidene]-1,3-dimethylbicyclo[2.2.2]octane-2,6-dione (1)
(1s)-1,5-anhydro-1-[2,4,6-trihydroxy-3-(4-hydroxybenzoyl)phenyl]-d-glucitol (1)
(1s,3r,4r,5r)-3-[(e)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy-1,5-dihydroxy-4-[(e)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoyl]oxycyclohexane-1-carboxylic acid (1)
(1s,4as,7s,7as)-7-hydroxy-7-methyl-1-[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-[(4-hydroxybenzoyl)oxymethyl]oxan-2-yl]oxy-4a,5,6,7a-tetrahydro-1h-cyclopenta[c]pyran-4-carboxylic acid (1)
(2-acetyloxy-3,6-diphenylcyclohexyl) acetate (1)
(2-aminoethoxy)[2-[docosa-4.7.10.13.16.19-hexaenoyloxy]-3-[hexadec-1-en-1-yloxy]propoxy]phosphinic acid (1)
(2-aminoethoxy)[2-[docosa-4.7.10.13.16.19-hexaenoyloxy]-3-[octadeca-1.9-dien-1-yloxy]propoxy]phosphinic acid (1)
(2-aminoethoxy)[2-[hexadec-9-enoyloxy]-3-[octadeca-1.11-dien-1-yloxy]propoxy]phosphinic acid (1)
(2-aminoethoxy)[3-[hexadec-1-en-1-yloxy]-2-[hexadec-9-enoyloxy]propoxy]phosphinic acid (1)
(2-aminoethoxy)[3-[hexadec-1-en-1-yloxy]-2-[icosa-5.8.11.14-tetraenoyloxy]propoxy]phosphinic acid (1)
(2-{[3-hydroxy-2-tetradecanamidooctadec-4-en-1-yl phosphonato]oxy}ethyl)trimethylazanium (1)
(2e,4e)-12-[(10e,12e)-13-carboxy-3-[(2e,4e)-13-carboxy-12,14-dihydroxy-3,5,7-trimethyltetradeca-2,4-dienoyl]oxy-2-(hydroxymethyl)-8,10,12-trimethyltrideca-10,12-dienoyl]oxy-13-(hydroxymethyl)-3,5,7-trimethyltetradeca-2,4-dienedioic acid (1)
(2e,6e,11e,13e)-18-(2,6-dioxopiperidin-4-yl)-9-hydroxy-8-methoxy-10,12,14-trimethyl-15-oxooctadeca-2,6,11,13-tetraenoic acid (1)
(2e,6e,12e)-18-(2,6-dioxopiperidin-4-yl)-9,11-dihydroxy-8-methoxy-10,12,14-trimethyl-15-oxooctadeca-2,6,12-trienoic acid (1)
(2r)-2-[(2r,5s)-5-[(2s)-2-hydroxybutyl]oxolan-2-yl]propanoic acid (1)
(2r,3r,3ar,5r)-5,7-dimethoxy-2-(7-methoxy-1,3-benzodioxol-5-yl)-3-methyl-3a-prop-2-enyl-2,3,4,5-tetrahydro-1-benzofuran-6-one (1)
(2r,3s,4as,7r,8r,8as)-2,3,4'-trihydroxy-4,4,7,8a-tetramethylspiro[2,3,4a,5,6,7-hexahydro-1h-naphthalene-8,2'-7,8-dihydro-3h-furo[2,3-e]isoindole]-6'-one (1)

First Public Date

2026 (4)
2025 (3)
2023 (1)
2020 (1)
2015 (1)
2014 (1)

Study type

Transcription profiling by array (3)
Unknown experiment type (1)

Release Date

2025 (11)
2015 (9)
2022 (8)
2021 (8)
2019 (6)
2024 (5)
2020 (5)
2014 (5)
2018 (4)
2017 (4)
2016 (4)
2023 (3)
2013 (3)
2012 (3)
2010 (2)
2026 (2)
2008 (2)
2006 (1)
2011 (1)
2009 (1)

Lab affiliation

Molecular Physiology & Biophysics, Wright Lab, University of Iowa, USA (2)
Advanced Clinical Biosystems Research Institute, Department of Medicine and The Heart Institute, Cedars-Sinai Medical Center, Los Angeles, California 90048, United States (1)
Beijing Institute of Technology (1)
Debora Bonenfant, Novartis Institutes for Biomedical Research, Basel, Switzerland (1)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States (1)
Department of Immunology and Cell Biology, Faculty of Medicine and Health Sciences, Université de Sherbrooke, Sherbrooke, QC J1H 5N4, Canada; Centre de Recherche, Centre Hospitalier Universitaire de Sherbrooke, Sherbrooke, QC J1H 5N4, Canada (1)
Department of Medical Biochemistry and Biophysics, Karolinska Institutet, SE-17177 Stockholm, Sweden Max Planck Institute for Biology of Ageing - Karolinska Institutet Laboratory, Karolinska Institutet, Stockholm 17177, Sweden (1)
Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden (1)
Departments of Radiation Oncology, The University of Michigan Medical School, Ann Arbor, Michigan 48109. (1)
Diabetes, Endocrinology and Metabolism at Beth Israel Deaconess Medical Center and Harvard Medical School. Howard Hughes Medical Institute. Boston, MA, 02115 (1)
Environmental Research and Innovation Department, Luxembourg Institute of Science and Technology, 41, Rue du Brill, L-4422 Belvaux, Luxembourg (1)
Estonia University of Tartu Faculty of Science and Technology Institute of Molecular and Cell Biology Chair of Genetics (1)
Head Proteomics Group, Leiden University Medical Center, Center for Proteomics and Metabolomics, PO Box 9600, Postal zone P1-Q, 2300 RC Leiden, The Netherlands (1)
Institut Pasteur, Université Paris Cité, CNRS UMR3528, Biochimie des Interactions Macromoléculaires, F-75015 Paris, France (1)
Jennifer Van Eyk, PhD, FAHA and FISHR Director, Advanced Clinical Biosystems Research Institute Professor, Heart Institute and Department of Medicine, Director, Basic Science for the Barbra Streisand Women's Heart Center Erika Glazer Endowed Chair in Women Heart Cedars Sinai Medical Center 127 S. San Vicente Blvd. Advanced Health Science Pavilion A9307 Los Angeles, CA 90048 and Professor, Departments of Medicine and Biological Chemistry, Johns Hopkins University (1)
Jennifer Van Eyk, PhD, FAHA and FISHR Director, Advanced Clinical Biosystems Research Institute Professor, Heart Institute and Department of Medicine, Director, Basic Science for the Barbra Streisand Women's Heart Center Erika Glazer Endowed Chair in Women Heart Cedars Sinai Medical Center 127 S. San Vicente Blvd. Advanced Health Science Pavilion A9307 Los Angeles, CA 90048 and Professor, Departments of Medicine and Biological Chemistry, Johns Hopkins University Baltimore (1)
Karolinska Institutet, Stockholm, Sweden (1)
Keck MS & Proteomics Resource Yale School of Medicine (1)
LIST-ERIN-BEAP, Belvaux, LUXEMBOURG (1)
Leibniz Institute for Natural Product Research and Infection Biology, Department of Molecular and Applied Microbiology, Stress- and Immunoproteomics group (1)
Office for Research, Griffith University, Southport, QLD 4222, Australia (1)
Proteomics Core Facility, Sahlgrenska Academy, University of Gothenburg, Sweden (1)
Proteomics Core Facility, Sahlgrenska Academy, University of Gothenburg (1)
Sanquin Research, Department of Molecular and Cellular Hemostasis and Utrecht University (1)
School of Biological Sciences Victoria University of Wellington New Zealand (1)
School of Life Sciences, The Chinese University of Hong Kong (1)
Technical University of Munich (TUM), TUM School of Natural Sciences, Department Biosciences, Chair of Organic Chemistry II, Center for Functional Protein Assemblies (CPA), Ernst-Otto-Fischer Str. 8, Garching 85748, Germany (1)
US Army Edgewood Chemical Biological Center, Biosciences Division, E3150, Aberdeen Proving Ground, MD 21010 (1)
Universidad Simón Bolívar, Facultad de Ciencias Básicas y Biomédicas, Centro de Investigaciones en Ciencias de la Vida, Barranquilla, Colombia (1)
University of Arizona College of Medicine-Tucson (1)

Tags

xref:PubMed:42210309 (2)
xref:PubMed:38965504 (1)
xref:PubMed:15932967 (1)
xref:PubMed:40199326 (1)
xref:PubMed:25491309 (1)

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Mechanisms affecting fluoride tolerance in the environmental bacterium Pseudomonas putida

Fluoride is the anionic form of fluorine, the 13th most abundant element in Earth's crust, and it is toxic to many organisms above a threshold concentration. Environmental bacteria can withstand relatively high fluoride concentrations, but the only mechanism described so far is the CrcB-dependent ef...

ORGANISM(S): Pseudomonas putida KT2440

2026-03-30 | PXD068884 | Pride

Amino acid deprivation due to overexpression of UCP1 in skeletal muscle: signalling via FGF-21

Recent studies on mouse and human skeletal muscle (SM) demonstrated the important link between mitochondrial function and the cellular metabolic adaptation. To identify key compensatory molecular mechanisms in response to chronic mitochondrial distress, we analyzed mice with ectopic SM respiratory u...

ORGANISM(S): Mus musculus

2015-02-17 | E-GEOD-45991 | biostudies-arrayexpress

Characterization of Dark Septate Endophytes Under Drought and Rehydration and Their Compensatory Mechanisms in Astragalus membranaceus.

Not available

S-EPMC11596847 | biostudies-literature

Overall grazing tolerance index (overall GTI) is not an ideal predictor for describing a single-species tolerance to grazing.

Not available

S-EPMC6468136 | biostudies-literature

Investigation of the mechanisms of VEGF-mediated compensatory lung growth: the role of the VEGF heparin-binding domain.

Not available

S-EPMC8178332 | biostudies-literature

Resource availability and repeated defoliation mediate compensatory growth in trembling aspen (Populus tremuloides) seedlings.

Not available

S-EPMC4106189 | biostudies-literature

Phosphoproteomic Analysis Suggests Compensatory Effects in the Piriform Cortex Region of the VX-Exposed Rat

To gain insight into the toxicity induced by VX, a mass spectrometry based phosphoproteomics approach was employed to understand the signaling modulated by VX toxicity in piriform cortex region of the rat brain. We have employed isobaric-based TMT labeling and titanium dioxide- based enrichment str...

ORGANISM(S): Rattus norvegicus (Rat)

2015-01-07 | PXD001184 | Pride

Vx Phosphoproteomics Signaling

Loss of CorA the primary magnesium transporter of Salmonella is alleviated by PhoP and MgtA-dependent mechanisms

In many Gram-negative bacteria, the stress sigma factor of RNA polymerase, σS/RpoS, remodels global gene expression to reshape the physiology of quiescent cells and ensure their survival under non-optimal growth conditions. In the foodborne pathogen Salmonella enterica serovar Typhimurium, σS is als...

ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium str. ATCC 14028

2023-10-24 | PXD041489 | Pride

Shotgun proteomics Q exactive plus Salmonella enterica serovar typhimurium

A host-pathogen metabolic synchrony that facilitates disease tolerance.

Not available

S-EPMC12009439 | biostudies-literature

Mechanisms of Resistance to PI3K Inhibitors in Cancer: Adaptive Responses, Drug Tolerance and Cellular Plasticity.

Not available

S-EPMC8037590 | biostudies-literature

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