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TranscriptomicsGenomic analysis of diffuse pediatric low-grade gliomas identifies recurrent, oncogenic MYBL1-truncating rearrangements
Pediatric low-grade gliomas (PLGGs) are among the most common solid tumors in children but apart from BRAF mutations or duplications in specific subclasses, few genetic driver events are known. Diffuse PLGGs comprise a set of uncommon subtypes that exhibit invasive growth and are therefore especiall...
ORGANISM(S): Homo sapiens 
2013-04-23 | E-GEOD-45843 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Danio rerio livers following chronic waterborne copper exposure
Zebrafish exposed to 2 waterborne copper concentrations (8 & 15 ug/L) in softwater for 21 days. Fish were terminally sampled and livers extracted for RNA extraction and hybridization to micorarrays
ORGANISM(S): Danio rerio 
2009-09-01 | E-MEXP-2287 | biostudies-arrayexpress
MetabolomicsMetabolic differences in ripening of Solanum lycopersicum 'Ailsa Craig' and three monogenic mutants (alternative assay to MTBLS36)
The purpose of this study was to highlight metabolic differences between different cultivars of tomato through development and ripening. Application of mass spectrometry enables the detection of metabolic differences between groups of related organisms. Differences in the metabolic fingerprints of w...
2017-10-18 | MTBLS73 | MetaboLights
MetabolomicsMetabolic differences in ripening of Solanum lycopersicum 'Ailsa Craig' and three monogenic mutants
Application of mass spectrometry enables the detection of metabolic differences between groups of related organisms. Differences in the metabolic fingerprints of wild-type Solanum lycopersicum and three monogenic mutants, ripening inhibitor (rin), non-ripening (nor) and Colourless non-ripening (Cnr)...
2014-02-07 | MTBLS36 | MetaboLights
UnknownBayesian reconstruction of P(r) directly from two-dimensional detector images via a Markov chain Monte Carlo method.
Not available
S-EPMC3627411 | biostudies-literature
TranscriptomicsTranscription profiling of NIH3T3 cells treated with platelet-derived growth factor and Src kinase inhibitors to identify immediate early genes that are induced by PDGF through Src family kinases and other kinases.
This experiment was performed to identify immediate early genes that were induced by PDGF specifically through Src family kinases (SFKs), MEK1/2, or PI 3-K.
ORGANISM(S): Mus musculus 
2007-09-22 | E-GEOD-2196 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of human HPV-positive and -negative head/neck and cervical cancers
Human papillomaviruses (HPVs) are associated with nearly all cervical cancers (CCs), 20-30% of head and neck cancers (HNCs), and other cancers. Because HNCs also arise in HPV-negative patients, this type of cancer provides unique opportunities to define similarities and differences of HPV-positive v...
ORGANISM(S): Homo sapiens 
2008-06-15 | E-GEOD-6791 | biostudies-arrayexpress
UnknownExploring structural variation and gene family architecture with De Novo assemblies of 15 Medicago genomes.
Not available
S-EPMC5369179 | biostudies-literature
UnknownIdentification of clustered microRNAs using an ab initio prediction method.
Not available
S-EPMC1315341 | biostudies-literature
UnknownAssociations between stool micro-transcriptome, gut microbiota, and infant growth.
Not available
S-EPMC8675179 | biostudies-literature
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