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ModelsMcClean2007_CrossTalk
This model encoded according to the paper Cross-talk and decision making in MAP kinase pathways. Supplementary Figure 2 has been reproduced by COPASI4.0.20 (development) using parameter scan method. You probably need to uncheck "always use initial conditions" in copasi when you simula...
2024-09-02 | BIOMD0000000116 | BioModels
UnknownNuclear–cytoskeletal linkages facilitate cross talk between the nucleus and intercellular adhesions
Not available
S-JCBD-201502024 | bioimages
TranscriptomicsTranscriptome evaluation of gene expression changes during carotenoid accumulation in the storage root of carrot (Daucus carota)
In this study, a cross species hybridization (CSH) approach was used to evaluate whole transcriptome changes during carotenoid accumulation in the storage root of carrot (Daucus carota). Carotenoids are isoprenoid compounds providing red, yellow and orange color to plants. Previous gene expression a...
ORGANISM(S): Daucus carota 
2014-08-13 | E-GEOD-49873 | biostudies-arrayexpress
UnknownSymptom Clusters in Adults With Chronic Atrial Fibrillation.
Not available
S-EPMC5116287 | biostudies-literature
TranscriptomicsA Genetic Interaction Map of RNA Processing Factors Reveals Links Between mRNA Processing Complexes
All classes of RNA undergo processing. The two largest RNA processing complexes are those involved in rRNA biogenesis and mRNA splicing. Because of their complexity and essential roles, it has been difficult to dissect the functional interactions within these machines as well as to identify possible...
ORGANISM(S): Saccharomyces cerevisiae 
2008-12-30 | E-GEOD-11634 | biostudies-arrayexpress
TranscriptomicsTransient Pairing of Homologous Oct4 Alleles Accompanies the Onset of Embryonic Stem Cell Differentiation
The relationship between chromatin organization and transcriptional regulation is an area of intense investigation. We have characterized the spatial relationships between alleles of the Oct4, Sox2, and Nanog genes in single cells during the earliest stages of mouse embryonic stem cell (ESC) differe...
ORGANISM(S): Mus musculus 
2015-02-03 | E-GEOD-65510 | biostudies-arrayexpress
ProteomicsCLPB disaggregase dysfunction impacts the functional integrity of the proteolytic SPY complex
CLPB is a mitochondrial intermembrane space AAA+ domain–containing disaggregase. CLPB mutations are associated with 3-methylglutaconic aciduria and neutropenia; however, the molecular mechanism underscoring disease and the contribution of CLPB substrates to disease pathology remains unknown. Interac...
ORGANISM(S): Homo sapiens (Human) 
2024-01-18 | PXD042313 | Pride
Disaggregase Protein transport Mitochondria Protein quality control Mitochondrial disease 
TranscriptomicsChromatin immunoprecipitation of Tcf3, Oct4 and nanog in mouse embryonic stem cells
Embryonic stem cells have a unique regulatory circuitry, largely controlled by the transcription factors Oct4, Sox2 and Nanog, which generates a gene expression program necessary for pluripotency and self-renewal (Boyer et al. 2005; Loh et al. 2006; Chambers et al. 2003; Mitsui et al. 2003; Nichols ...
ORGANISM(S): Mus musculus 
2008-02-28 | E-TABM-409 | biostudies-arrayexpress
TranscriptomicsAlterations to the Synaptic Transcriptome in Response to Ethanol-Induced Behavioral Sensitization in DBA/2J Mice
Alcoholism is a complex neurological disorder characterized by loss of control in limiting intake, and progressive compulsion to seek and consume ethanol. Prior studies have suggested that the characteristic behaviors associated with escalation of drug use are caused, at least in part, by ethanol-ev...
ORGANISM(S): Mus musculus 
2016-09-01 | E-GEOD-73018 | biostudies-arrayexpress
GenomicsAllele-specific binding of ZFP57 in the regulation of imprinted and mono-allelic expression
Selective maintenance of genomic methylation imprints during pre-implantation development is required for parental origin-specific expression of imprinted genes. The Kruppel-like zinc finger protein ZFP57 acts as a factor necessary for maintaining the DNA methylation memory at multiple imprinting co...
ORGANISM(S): Mus musculus 
2015-05-08 | E-GEOD-55382 | biostudies-arrayexpress
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