Cryo-et - OmicsDI

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Unknown (458)
Proteomics (52)
Genomics (15)
Transcriptomics (11)
Metabolomics (3)
Other (1)

Organisms

Allexis (46)
Arabidopsis thaliana (46)
Callinectes sapidus (46)
Cyanophora paradoxa (46)
Ensifer adhaerens (46)
Entamoeba histolytica (46)
Escherichia coli (46)
Histomonas meleagridis (46)
Leishmania major strain Friedlin (46)
Listeria monocytogenes (46)
Lotus japonicus (46)
Medicago truncatula (46)
Methylohalobius crimeensis 10Ki (46)
Mus musculus (46)
Mycobacterium tuberculosis (46)
NEWT:6915 (46)
Oryza sativa Indica Group (46)
Physcomitrium patens (46)
Pseudomonas putida KT2440 (46)
Rattus norvegicus (46)
Saccharomyces cerevisiae (46)
Schizosaccharomyces pombe (46)
Schizosaccharomyces pombe 972h- (46)
Mus musculus (9)
Bos taurus (2)
Saccharomyces cerevisiae x Saccharomyces paradoxus (1)
Macaca mulatta (1)
Arabidopsis thaliana (1)
Homo sapiens (1)
Nakaseomyces glabratus (1)

Organisms

Mus musculus (4)
Homo sapiens (4)
Enterococcus faecalis (1)

Repository

pride (46)
ENA (13)
biostudies-arrayexpress (10)
geo (4)
MassIVE (4)
MetaboLights (3)
iProX (2)

Tissue

Cell culture (8)
Brain (3)
Epithelial cell (2)
Skeletal muscle (2)
Testis (2)
Bladder (1)
Cell line cell (1)
Colon (1)
Cuticle (1)
Extracellular vesicle (1)
Haploid (1)
Heart (1)
Intestine (1)
Leaf (1)
Neuron (1)
Skin (1)
Sperm (1)
Whole body (1)

Disease

Alzheimer's disease (1)
Cachexia (1)
Colorectal cancer (1)
Disease free (1)
Immunoglobulin light chain amyloidosis (1)
Infertility (1)
Multiple sclerosis (1)

Technology Type

Mass Spectrometry (46)
Shotgun proteomics (23)
Bottom-up proteomics (8)
Affinity purification coupled with mass spectrometry proteomics (4)
Data-independent acquisition (4)
Mass spectrometry (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Data-dependent acquisition (2)
Gel-based experiment (2)
Top-down proteomics (2)
Mass spectrometry assay (1)
All-ion fragmentation (1)
DiaPASEF (1)
HDMSE (1)
MSE (1)
Mass spectrometry imaging (1)

Instrument Platform

Illumina HiSeq 2500 (3)
Beckman Coulter MoFlo XDP (1)
Becton Dickinson INFLUX (1)
Axon- GenePix4000B (1)
Illumina HiSeq 1500 (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 2000 (1)
NextSeq 500 (1)
Orbitrap Eclipse (1)
Orbitrap Fusion ETD (1)
Orbitrap Fusion Lumos (1)
TimsTOF HT (1)
TimsTOF Pro 2 (1)
Liquid Chromatography MS - alternating - reverse-phase (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2025 (18)
2024 (8)
2022 (7)
2026 (7)
2023 (7)
2018 (6)
2021 (5)
2020 (3)
2014 (2)
2013 (1)
2006 (1)
2016 (1)
2015 (1)

CHEBI ID

CHEBI:24835 (1)
CHEBI:48591 (1)
CHEBI:39270 (1)
CHEBI:24059 (1)
CHEBI:50917 (1)
CHEBI:24402 (1)
CHEBI:32955 (1)
CHEBI:36735 (1)
CHEBI:38776 (1)
CHEBI:59659 (1)
CHEBI:38193 (1)
CHEBI:25340 (1)
CHEBI:33833 (1)
CHEBI:48835 (1)
CHEBI:77383 (1)
CHEBI:38670 (1)
CHEBI:37739 (1)
CHEBI:38314 (1)
CHEBI:38093 (1)
CHEBI:24955; CHEBI:52898 (1)
CHEBI:38976; CHEBI:36820 (1)
CHEBI:38669 (1)
CHEBI:48588 (1)
CHEBI:47985 (1)
CHEBI:23245 (1)
CHEBI:39307 (1)
CHEBI:26767 (1)
CHEBI:24436 (1)
CHEBI:22715; CHEBI:35813 (1)
CHEBI:39268 (1)

Metabolite Name

Cycloartanols and derivatives (1)
Miscellaneous mixed metal/non-metals (1)
N-acylpiperidines (1)
Naphthofurans (1)
Fluorenes (1)
Oxasteroids and derivatives (1)
Galanthamine-type amaryllidaceae alkaloids (1)
Glycosphingolipids (1)
Aristolactams (1)
Oxirane carboxylic acids and derivatives (1)
Bilirubins (1)
Imidazoquinolines (1)
Pyrenes (1)
Phenylpyridines (1)
Organic nitro compounds (1)
Methylpyridines (1)
Heteroaromatic compounds (1)
Phenanthrolines (1)
Bisphosphonates (1)
Phosphonic acid esters (1)
Pyrrolo[2,3-d]pyrimidines (1)
Glycerophospholipids (1)
Pyrazines (1)
Phenylacetylindoles (1)
Phenothiazines (1)
Macrolactams (1)
Cyclohexylphenols (1)
Pyrazolo[1,5-a]pyrimidines (1)
Peptoid-peptide hybrids (1)
Aminopiperidines (1)

First Public Date

2022 (4)
2026 (3)
2025 (3)
2023 (2)
2024 (1)

Classification

bacteria (1)

Modification

4-tetrahydrothiazine-3-carboxylic acid (1)

Study type

RNA-seq of coding RNA (3)
RNA-seq of coding RNA from single cells (2)
High-throughput sequencing (1)
ChIP-seq (1)
Transcription profiling by array (1)
Methylation profiling by array (1)
RNA-seq of total RNA (1)

Release Date

2025 (90)
2024 (65)
2023 (61)
2022 (52)
2020 (42)
2021 (35)
2018 (26)
2019 (22)
2017 (20)
2016 (15)
2026 (11)
2015 (8)
2014 (5)
2011 (4)
2012 (3)
2013 (2)
2010 (2)
2008 (2)
2006 (1)
2007 (1)
2004 (1)

Lab affiliation

ICM, Molecular Evolution, Uppsala University (2)
Molecular Genetics, RPTU Kaiserslautern (2)
1Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, University of Utrecht, Padualaan 8, 3584 CH Utrecht, The Netherlands 2Netherlands Proteomics Center, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (1)
Andreas Otto, Institute for Microbiology, Ernst-Moritz-Arndt-University of Greifswald, F.-L. Jahnstrasse 15, 17489 Greifswald, Germany (1)
Associate Professor (1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS), Technical University Munich, Freising, Germany (1)
Baylor College of Medicine (1)
Cambridge Centre for Proteomics, Department of Biochemistry, University of Cambridge, Cambridge, CB2 1QR UK (1)
Department for Systems Biology, Institut de recherches cliniques de Montréal (IRCM), Montréal, QC, Canada Département de biochimie et médecine moléculaire, Universitéde Montréal, Montréal, QC, Canada Division of Experimental Medicine, McGill University, Montreal, QC, Canada (1)
Department of Biochemistry & Pharmacology, Bio21 Molecular Science and Biotechnology Institute The University of Melbourne, Victoria, 3010 Australia (1)
Department of Biochemistry, University of Washington, Seattle, Washington, USA (1)
Department of Microbiology, Monash University, Australia (1)
Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX, USA Livestrong Cancer Institutes and Department of Oncology, Dell Medical School, The University of Texas at Austin, Austin, TX, USA (1)
Department of Molecular Life Sciences University of Zurich Winterthurerstrasse 190 CH-8057 Zurich Switzerland (1)
Director, Advanced Clinical Biosystems Research Institute, Cedars-Sinai Medical Center, Los Angeles, CA 90048 (1)
Division of Biology and Biological Engineering, California Institute of Technology,USA (1)
Faculty of Biology, University of Freiburg (1)
Faculty of Forestry and Wood Sciences, Czech University of Life Sciences Prague, Czech Republic. (1)
Histone Modifications Group Zentrallabor für Proteinanalytik BioMedical Center (Faculty of Medicine) Ludwig-Maximilians-University of Munich Großhadernerstr. 9 82152 Planegg-Martinsried GERMANY (1)
ID-FISH Technology Inc., Milpitas, CA 95035, USA (1)
Institut Européen de Chimie et de Biologie, U 1212 Inserm, Université de Bordeaux, 2 rue R.Escarpit, F-33600, Pessac, France (1)
Institut Pasteur, Université Paris Cité, Archaeal Virology Unit, 75015 Paris, France (1)
Institut Pasteur, Université Paris Cité, CNRS UMR3528, Biological NMR and HDX-MS Technological Platform, 75015, Paris, France. (1)
Institute of Biological Chemistry, Academia Sinica (1)
Institute of Microbiology, Department of Microbial Proteomics, University of Greifswald, Germany (1)
Institute of Molecular Biology gGmbH (IMB) (1)
Institute of Molecular Biosciences, University of Graz, Graz, 8010, Austria (1)
Institute of Physiology II Universität Freiburg Germany (1)
Lab Head, Department of Biochemistry and Pharmacology, The University of Melbourne (1)