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ProteomicsUltra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling
Regulatory protein phosphorylation controls nearly every normal and pathophysiological signaling system in eukaryotic cells. Despite great advances in mass spectrometry based-proteomics, the total number, localization and site-specific stoichiometry of this post-translational modification (PTM) are ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2017-03-28 | MSV000080701 | MassIVE
OtherSuper-SILAC allows classification of diffuse large B-cell lymphoma subtypes by their protein expression profiles.
Data from ProteomeXhchange, PXD ID: PXD002098. Experiment: TMD8(2), file: folder summary. Published as part of Mol Cell Proteomics. 2012 May;11(5):77-89 . From the Abstract: {{i}} ... Here we show that high accuracy, quantitative proteomics can robustly segregate cancer subtypes directly at the lev...
ORGANISM(S): Homo_sapiens_viruses, Human 
GPM32310019515 | GPMDB
Resource Reanalysis 
ProteomicsSystem-Wide Identification of Wild-Type SUMO-2 Conjugation Sites
SUMOylation is a reversible post-translational modification regulating all nuclear processes. Identification of SUMOylation sites by mass spectrometry has been hampered by bulky tryptic fragments, which thus far necessitated the use of mutated SUMO. Here, we present a dataset generated through a SUM...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2017-03-28 | MSV000080714 | MassIVE
ProteomicsSuper-SILAC Allows Classification of Diffuse Large B-cell Lymphoma Subtypes by Their Protein Expression Profiles
Correct classification of cancer patients into subtypes is a prerequisite for acute diagnosis and effective treatment. Currently this classification relies mainly on histological assessment, but gene expression analysis bymicroarrays has shown great promise. Here we show that high accuracy, quantita...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2016-03-10 | MSV000079572 | MassIVE
ProteomicsUncovering Global SUMOylation Signaling Networks in a Site-Specific Manner
SUMOylation is a reversible post-translational modification essential for genome stability. Using high-resolution mass spectrometry, we have studied global SUMOylation in mammalian cells and in a site-specific manner, identifying a total of over 4,300 SUMOylation sites in over 1,600 proteins. Moreov...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2017-03-29 | MSV000080793 | MassIVE
ProteomicsHs_Hela_Tyr_Pervanadate
HeLa S3 cells, Tyr phosphorylation, thymidine block and nocodazole arrest, treated with pervanadate
ORGANISM(S): Homo Sapiens (human) 
2014-12-31 | PAe005300 | PeptideAtlas
ProteomicsHs_Hela_Mitosis
HeLa S3 cells, double thymidine block and nocodazole arrest
ORGANISM(S): Homo Sapiens (human) 
2014-12-31 | PAe005289 | PeptideAtlas
ProteomicsHs_Hela_unstimulated
HeLa S3 cells, untreated control cells
ORGANISM(S): Homo Sapiens (human) 
2014-12-31 | PAe005278 | PeptideAtlas
ProteomicsHs_Hela_Tyr_unstimulated
HeLa S3 cells, Tyr phosphorylation, Control
ORGANISM(S): Homo Sapiens (human) 
2014-12-31 | PAe005272 | PeptideAtlas
ProteomicsHs_Hela_Tyr_Mitosis
HeLa S3 cells, Tyr phosphorylation, double thymidine block and nocodazole arrest
ORGANISM(S): Homo Sapiens (human) 
2014-12-31 | PAe005270 | PeptideAtlas
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