Dai Jian J - OmicsDI

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Unknown (31)
Proteomics (6)
Transcriptomics (4)
Metabolomics (3)
Genomics (2)

Organisms

Mus musculus (5)
Homo sapiens (5)
Gossypium hirsutum (1)
Bombyx mori (1)

Repository

biostudies-arrayexpress (6)
iProX (3)
MetaboLights (3)
pride (3)

Tissue

Amniotic fluid (1)
Blood plasma (1)
Early embryonic cell (1)

Disease

Antenatal onset (1)
Hydronephrosis (1)
Polycystic Kidney (1)

Technology Type

Mass Spectrometry (3)
Mass spectrometry (2)
Shotgun proteomics (2)
NMR spectroscopy (1)
Bottom-up proteomics (1)
Data-dependent acquisition (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)
Nuclear Magnetic Resonance (NMR) - (1)
Xevo QTof MS (Waters) (1)

Publication Date

2015 (3)
2010 (2)
2021 (2)
2024 (2)
2012 (1)
2026 (1)
2022 (1)
2016 (1)
2023 (1)
2020 (1)

CHEBI ID

CHEBI:16027 (2)
CHEBI:16704 (2)
CHEBI:17053 (2)
CHEBI:17568 (2)
CHEBI:17596 (2)
CHEBI:18346 (2)
CHEBI:24898 (2)
CHEBI:28300 (2)
CHEBI:30769 (2)
CHEBI:10002 (1)
CHEBI:10022 (1)
CHEBI:10037 (1)
CHEBI:10070 (1)
CHEBI:10072 (1)
CHEBI:10106 (1)
CHEBI:101064 (1)
CHEBI:10138 (1)
CHEBI:10432 (1)
CHEBI:10577 (1)
CHEBI:10607 (1)
CHEBI:107634 (1)
CHEBI:107641 (1)
CHEBI:107662 (1)
CHEBI:11060 (1)
CHEBI:113528 (1)
CHEBI:113543 (1)
CHEBI:116314 (1)
CHEBI:122 (1)
CHEBI:132121 (1)
CHEBI:132244 (1)

Metabolite Name

Inosine (2)
Isoleucine (2)
Uracil (2)
(+)-(s)-carvone (1)
(+)-ar-turmerone (1)
(+)-catechin (hydrate) (1)
(+/-)-c75 (1)
(+/-)-cannabichromeorcin (1)
(+/-)-cp 47,497-c7-hydroxy metabolite (1)
(-)-a-pinene (1)
(-)-camphanic acid (1)
(-)-camphor (1)
(-)-caryophyllene oxide (1)
(-)-epigallocatechin (1)
(-)-gallocatechin (1)
(-)-isopulegol (1)
(-)-pentazocine (1)
(-)-syringaresinol di-o-glucoside (1)
(1ar,2s,5s,6r,7r,7as)-5-methyl-1a-(3-methyl-2-buten-1-yl)-1a,3,5,6,7,7a-hexahydro-2h-oxireno[g]isochromene-2,6,7-triol (1)
(1r,3r,8s,10r,13s,16s,17r)-6,12,17-trihydroxy-16-methyl-8-(2-methyl-2-propanyl)-2,4,14,19-tetraoxahexacyclo[8.7.2.01,11 03,7 07,11 013,17]nonadecane-5,15,18-trione (1)
(1r,9r)-5-cyclohexyl-11-(propylsulfonyl)-7,11-diazatricyclo[7.3.1.02,7]trideca-2,4-dien-6-one (1)
(2S,3S,4R)-2-aminohexadecane-1,3,4-triol (1)
(2e,4ar,6r,7s,8e,10r)-10-acetoxy-4a-hydroxy-1,1,3,6,9-pentamethyl-4-oxo-1a,4,4a,5,6,7,7a,10,11,11a-decahydro-1h-cyclopenta[a]cyclopropa[f][11]annulen-7-yl benzoate (1)
(2s,3s)-3,5,7-trihydroxy-6-methyl-2-(3,4,5-trihydroxyphenyl)-2,3-dihydro-4h-chromen-4-one (1)
(3ar,4s,6r,11ar)-6,9-dihydroxy-6,10-dimethyl-3-methylene-2,7-dioxo-2,3,3a,4,5,6,7,8,9,11a-decahydrocyclodeca[b]furan-4-yl methacrylate (1)
(3as,10ar,10br)-6,10a-dimethyl-3-methylene-3,3a,4,5,7,8,10a,10b-octahydrofuro[3',2':6,7]cyclohepta[1,2-b]pyran-2,9-dione (1)
(3e,12e)-3,12-dimethyl-8-methylene-6,18-dioxatricyclo[14.2.1.05,9]nonadeca-3,12,16(19)-triene-7,17-dione (1)
(4e)-1,7-bis(4-hydroxyphenyl)-4-hepten-3-one (1)
(5r,6s)-5-hydroxy-4-methoxy-6-(2-phenylethyl)-5,6-dihydro-2h-pyran-2-one (1)
(7r,8s)-7,8-dihydroxy-3,7-dimethyl-6-oxo-7,8-dihydro-6h-isochromene-5-carbaldehyde (1)

Study type

Methylation profiling by high throughput sequencing (2)
RNA-seq of coding RNA (2)
Comparative genomic hybridization by array (1)
Transcription profiling by array (1)

Release Date

2025 (6)
2023 (5)
2021 (4)
2015 (3)
2024 (3)
2022 (3)
2020 (3)
2010 (2)
2019 (2)
2018 (2)
2012 (1)
2016 (1)
2014 (1)
2011 (1)

Lab affiliation

Department of Obstetrics, Xiangya Hospital Central South University, Changsha, China (1)
Department of Radiation Oncology, Nanfang Hospital, Southern Medical University (1)
Département de Biologie Cellulaire Université de Genève Sciences III 30, quai Ernest-Ansermet CH - 1211 Genève 4, Switzerland (1)

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The alteration of 5-hydroxymethylcytosine modification contributes to ischemic brain injury [5hmC-seq]

Epigenetic modifications, such as cytosine methylation and histone modification, have been shown involved in the pathology of ischemic brain injury. Recent works have implicated 5-hydroxymethylcytosine (5hmC), a DNA base derived from 5-methylcytosine (5mC) through the oxidation by Ten-Eleven Translo...

ORGANISM(S): Mus musculus

2015-09-08 | E-GEOD-67188 | biostudies-arrayexpress

Jian-Pi-Yi-Shen formula improves kidney function by regulating gut microbiome in rats with chronic kidney disease.

Not available

S-EPMC12283701 | biostudies-literature

Expression data from the process of chilling stress causing Alternaria alternata infection and leading to cotton leaf senescence

Cotton premature leaf senescence often occurred with an increasing frequency in many cotton growing areas and caused serious reduction in yield and quality of cotton has been one of the impontant factors that restrict severely the production of cotton.Our laboratory studies showed chilling stress is...

ORGANISM(S): Gossypium hirsutum

2015-10-28 | E-GEOD-74412 | biostudies-arrayexpress

Combined loss of Tet1 and Tet2 promotes B-cell, but not myeloid malignancies in mice

TET1/2/3 are methylcytosine dioxygenases regulating cytosine hydroxymethylation in the genome. Tet1 and Tet2 are abundantly expressed in HSC/HPCs and implicated in the pathogenesis of hematological malignancies. Tet2-deletion in mice causes myeloid malignancies, while Tet1-null mice develop B-cell l...

ORGANISM(S): Mus musculus

2015-11-12 | E-GEOD-73611 | biostudies-arrayexpress

Low chorionic villous succinate accumulation associates with recurrent spontaneous abortion risk

Dysregulated extravillous trophoblast invasion and proliferation are known to increase the risk of recurrent spontaneous abortion (RSA); however, the underlying mechanism remains unclear. Herein, in our retrospective observational case-control study we show that villous samples from RSA patients, co...

2021-10-06 | MTBLS2148 | MetaboLights

Proteomics study of antenatal hydronephrosis patients on amniotic fluid

In this study, we carried out a comprehensive comparative proteomic and transcriptomic analysis of exosomes in amniotic fluid supernatant and cells in amniotic fluid precipitation of severe fetal hydronephrosis patients to identify candidate biomarkers with diagnostic potential. As the investigation...

ORGANISM(S): Homo sapiens (Human)

2023-10-24 | PXD033988 | Pride