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TranscriptomicsDifferential DNA methylation profiles of coding and non-coding genes define hippocampal sclerosis in human temporal lobe epilepsy - miRNA
Methylation profiling was carried using Methylated DNA immunoprecipitation coupled with microarray consisting of custom designed Nimblegen arrays with tiled regions 50kb upstream and 20kb downstream of all 754 miRNAs for human tissue samples. The samples, i.e. immunoprecipitate & input were defer...
ORGANISM(S): Homo sapiens 
2014-12-01 | E-MTAB-3055 | biostudies-arrayexpress
TranscriptomicsNeuroblastoma Disease Pathogenesis is Modulated By Epigenetically Regulated MicroRNAs
Methylated DNA immunoprecipitaion (MeDIP) from primary neuroblastoma tumors and cell lines treated with retinoic acid hybridized to miRNA custom designed tiling arrays.
ORGANISM(S): Homo sapiens 
2012-10-16 | E-MEXP-3498 | biostudies-arrayexpress
TranscriptomicsNeuroblastoma Disease Pathogenesis is Modulated By Epigenetically Regulated MicroRNAs - Gene expression data
The data represents gene expression data from 42 primary neuroblastoma tumors using Affymetrix exon arrays. Data on an accompanying MeDIP experiment on tiling arrays is also available from ArrayExpress (see E-MEXP-3498).
ORGANISM(S): Homo sapiens 
2012-10-16 | E-MEXP-3517 | biostudies-arrayexpress
TranscriptomicsElucidating a normal function of huntingtin by analysis of huntingtin-null mouse embryonic fibroblasts
The polyglutamine expansion in huntingtin (Htt) protein is a cause of Huntington’s disease (HD). Htt is an essential gene as deletion of the mouse Htt gene homolog (Hdh) is embryonic lethal in mice. Therefore, in addition to elucidating the mechanisms responsible for polyQ-mediated pathology, it i...
ORGANISM(S): Mus musculus 
2008-04-12 | E-GEOD-11139 | biostudies-arrayexpress
TranscriptomicsMECP2 ChIP-chip and MeDIP-chip experiments
Comparison of MYCN and MECP2 genome wide binding sites in the neuroblastoma genome
ORGANISM(S): Homo sapiens 
2012-04-05 | E-MTAB-621 | biostudies-arrayexpress
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