David Jonathan J

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CHEBI ID

CHEBI:33282 (1)
CHEBI:62959 (1)
CHEBI:62958 (1)
CHEBI:32797 (1)
CHEBI:380 (1)
CHEBI:11036 (1)
CHEBI:16782 (1)
CHEBI:18739 (1)
CHEBI:18738 (1)
CHEBI:62621 (1)
CHEBI:26638 (1)
CHEBI:47569 (1)
CHEBI:9098 (1)
CHEBI:27277 (1)
CHEBI:30816 (1)
CHEBI:46315 (1)
CHEBI:27278 (1)
CHEBI:15301 (1)
CHEBI:9933 (1)
CHEBI:16632 (1)
CHEBI:46497 (1)
CHEBI:46502 (1)
CHEBI:36272 (1)
CHEBI:30518 (1)
CHEBI:36271 (1)
CHEBI:26894 (1)
CHEBI:9474 (1)
CHEBI:45729 (1)
CHEBI:27902 (1)
CHEBI:71392 (1)

Metabolite Name

AN11736 (1)
Ursodeoxycholic Acid-D4 (1)
Tauroursodeoxycholic acid-D4 (1)
Taurodeoxycholic acid-D4 (1)
Taurocholic Acid-D4 (1)
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Sphingomyelin (d18:1/24:1, d18:2/24:0)* (1)
Pyroglutamine* (1)
Pentadecanoate (15:0) (1)
P-cresol-glucuronide* (1)
Oleic ethanolamide (1)
Oleate (18:1n9) (1)
N1-methylguanosine (1)
N-acetylkynurenine (2) (1)
N-acetyl-aspartyl-glutamate (NAAG) (1)
N-acetyl-3-methylhistidine* (1)

IsPrivate

False (4)

Submitter Keywords

Ersilia (1)
FAIR-AIML (1)
Machine Learning Model (1)
FROG (1)
COVID-19 (1)
Immuno-oncology (1)

First Public Date

2013 (1)

Modelling Approach

Computational model (1)
Population model (1)
Ordinary differential equation model (1)
Constraint-based model (1)

Study type

Transcription profiling by array (24)
ChIP-seq (6)
RNA-seq of coding RNA (3)
Unknown experiment type (1)
ChIP-chip by tiling array (1)
Genotyping by array (1)
DNA-seq (1)

Release Date

2021 (10)
2013 (8)
2010 (8)
2025 (7)
2012 (7)
2015 (6)
2024 (6)
2023 (6)
2020 (6)
2014 (5)
2011 (5)
2018 (5)
2022 (4)
2009 (4)
2017 (4)
2016 (4)
2008 (3)
2007 (3)
2019 (3)
2006 (1)

Lab affiliation

German Center for Neurodegenerative Diseases (DZNE), Tuebingen, Germany (1)
University of Cambridge, Department of Chemistry (1)

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Reduced insulin/IGF-1 signaling restores the dynamic properties of key stress granule proteins during aging

Low complexity “prion-like” domains in key RNA-binding proteins (RBPs) mediate the reversible assembly of RNA granules. Individual RBPs harboring these domains have been linked to specific neurodegenerative diseases. Although their aggregation in neurodegeneration has been extensively characterized,...

ORGANISM(S): Caenorhabditis elegans

2017-01-16 | PXD003451 | Pride

[E-MTAB-599] Mouse Transcriptome

Sequencing the transcriptome of DBAxC57BL/6J mice. To study the regulation of transcription, splicing and RNA turnover we have sequenced the transcriptomes of tissues collected DBAxC57BL/6J mice. We strongly encourage researchers to contact us if there is any queries about referencing or publishing ...

ORGANISM(S): Mus musculus

2011-07-14 | GSE30617 | GEO

Eftimie2010 - immunity to melanoma

The paper describes a model of immunity to melanoma. Created by COPASI 4.25 (Build 207) This model is described in the article: Modeling anti-tumor Th1 and Th2 immunity in the rejection of melanoma Raluca Eftimie, Jonathan L. Bramson, David J.D. Earn Journal of Theoretical Biology 265 (2010) 4...

2024-09-02 | BIOMD0000000768 | BioModels

Immuno-oncology

Oral dysbiosis initiates periodontal disease in experimental kidney disease