Davis P P - OmicsDI

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Unknown (13806)
Transcriptomics (315)
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Models (1)

Organisms

Homo sapiens (247)
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Drosophila melanogaster (46)
Saccharomyces cerevisiae (15)
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Organisms

Homo sapiens (14)
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Repository

biostudies-arrayexpress (374)
pride (117)
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2015 (28)
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2006 (4)
2004 (2)
2003 (1)
2002 (1)

CHEBI ID

CHEBI:30769 (10)
CHEBI:17154 (9)
CHEBI:17368 (9)
CHEBI:15354 (8)
CHEBI:16393 (8)
CHEBI:16704 (8)
CHEBI:16708 (8)
CHEBI:16737 (8)
CHEBI:16750 (8)
CHEBI:16919 (8)
CHEBI:17562 (8)
CHEBI:17568 (8)
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CHEBI:25017 (8)
CHEBI:10072 (7)
CHEBI:15428 (7)
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CHEBI:15727 (7)
CHEBI:15760 (7)
CHEBI:15891 (7)
CHEBI:16040 (7)
CHEBI:16235 (7)
CHEBI:16335 (7)
CHEBI:16610 (7)
CHEBI:16742 (7)
CHEBI:17306 (7)
CHEBI:17620 (7)
CHEBI:17754 (7)
CHEBI:17768 (7)

Metabolite Name

Xylose (8)
Adenine (7)
Alanine (7)
Fructose (7)
Glucose (7)
Glutamine (7)
Glycine (7)
Isoleucine (7)
Leucine (7)
Methionine (7)
Myo-inositol (7)
Phenylalanine (7)
Phosphate (7)
Proline (7)
Serine (7)
Threonine (7)
Tyrosine (7)
Uracil (7)
Adenosine (6)
Alpha-ketoglutarate (6)
Asparagine (6)
Beta-alanine (6)
Erythritol (6)
Glycerol (6)
Lysine (6)
Ornithine (6)
Ribitol (6)
Ribose (6)
Spermidine (6)
Tryptophan (6)

IsPrivate

False (1)

First Public Date

2021 (9)
2014 (9)
2025 (6)
2023 (5)
2022 (5)
2019 (5)
2018 (5)
2026 (4)
2020 (4)
2024 (3)
2016 (2)
2013 (2)
2017 (1)
2015 (1)

Classification

bacteria (2)
viruses (1)

Modelling Approach

Ordinary differential equation model (1)

Modification

Not available (1)

Study type

Transcription profiling by array (197)
ChIP-seq (59)
RNA-seq of coding RNA (42)
Unknown experiment type (17)
Comparative genomic hybridization by array (17)
Other (8)
RNA-seq of non coding RNA (6)
ChIP-chip by tiling array (5)
Transcription profiling by tiling array (5)
Methylation profiling by array (4)
RNA-seq of coding RNA from single cells (4)
Genotyping by array (2)
RNA-seq of total RNA (2)
Animal - High-throughput sequencing (1)
Cell line - High-throughput sequencing (1)
RNAi profiling by array (1)
ChIP-chip by array (1)
ScATAC-seq (1)
DNA-seq (1)

Release Date

2022 (1406)
2021 (1347)
2023 (1306)
2025 (1206)
2024 (1128)
2020 (1103)
2019 (955)
2018 (801)
2017 (719)
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2014 (539)
2013 (435)
2012 (380)
2011 (352)
2010 (312)
2009 (193)
2026 (190)
2008 (143)
2007 (87)
2006 (68)
2005 (29)
2004 (26)
2003 (14)
2002 (13)
2001 (12)
2000 (10)
1998 (7)
1999 (6)
1997 (3)

Lab affiliation

Department of Leukemia, Division of Cancer Medicine, The University of Texas MD Anderson Cancer Center, Houston, TX (6)
Department of Molecular and Cellular Biology, College of Biological Sciences, University of California, Davis, CA, 95616, USA (3)
Indiana University School of Medicine (3)
Department of Biochemistry, University of Washington, Seattle, WA, USA (2)
Department of Plant Pathology, University of California, Davis (2)
Lab Head, UQ Diamantina Institute,The University of Queensland (2)
Memorial Sloan Kettering Cancer Center (2)
Segal Cancer Proteomics Centre,Lady Davis Institute, Jewish General Hospital (2)
University of Missouri-Columbia (2)
Wayne State University Chemistry (2)
1. Division of Experimental Medicine, McGill University, Montreal, QC 2. Segal Cancer Proteomics Centre, Lady Davis Institute for Medical Research, Jewish General Hospital, Montreal, QC 3. Department of Pathology, Segal Cancer Centre, Lady Davis Institute for Medical Research, Jewish General Hospital, McGill University, Montreal, QC 4. Segal Cancer Centre, Lady Davis Institute for Medical Research, Jewish General Hospital, Montreal, QC 5. Department of Oncology, McGill University, Montreal, QC (1)
1Laboratory of Cytometry, Nencki Institute of Experimental Biology, Polish Academy of Sciences, Warsaw, Poland (1)
Associate Professor School of Life Sciences University of Hawaii at Manoa (1)
Carnegie Mass Spectrometry Facility (1)
Core Labs, King Abdullah University of Science and Technology, Thuwal, KSA (1)
DZNE Munich Neuroproteomics Feodor-Lynen Str. 17 81377 Munich Germany (1)
DZNE Munich, Neuroproteomics, Feodor-Lynen-Str. 17, 81377 München, Germany (1)
DZNE: German center for Neurodegenerative Diseases, Munich, https://www.dzne.de/index.php?id=105&L=1 (1)
Department Plant Pathology, University of California, Davis (1)
Department of Basic Medical Sciences, University of Arizona College of Medicine, Phoenix, AZ 85004, USA (1)
Department of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA (1)
Department of Biochemistry and Molecular Biology University of Arkansas for Medical Sciences USA (1)
Department of Biochemistry, University of Oxford, UK (1)
Department of Cell and Regenerative Biology Department of Chemistry Director of Mass Spectrometry Human Proteomics Program University of Wisconsin-Madison (1)
Department of Chemical & Systems Biology Stanford University USA (1)
Department of Chemical & Systems Biology, Stanford University, USA (1)
Department of Chemistry Indiana University Bloomington United States (1)
Department of Earth and Environmental Science, Columbia University; Lamont-Doherty Earth Observatory, Columbia University (1)
Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology (1)
Department of Integrative Biology, University of California Berkeley (1)

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Satellite cell expansion is mediated by P-eIF2α-dependent Tacc3 translation

PRJNA691923 | ENA

Low-Protein Infant Formula Enriched with Alpha-Lactalbumin during Early Infancy May Reduce Insulin Resistance at 12 Months: A Follow-Up of a Randomized Controlled Trial.

Not available

S-EPMC11013926 | biostudies-literature

Association between Exposure to <i>p,p</i>'-DDT and Its Metabolite <i>p,p</i>'-DDE with Obesity: Integrated Systematic Review and Meta-Analysis.

Not available

S-EPMC5915185 | biostudies-literature

Transcription profiling of Drosophila developmental time series

Michelle N. Arbeitman, Eileen E. M. Furlong, Farhad Imam, Eric Johnson, Brian H. Null, Bruce S. Baker, Mark A. Krasnow, Matthew P. Scott, Ronald W. Davis and Kevin P. White. Gene Expression During the Life Cycle of Drosophila melanogaster, Science, 297: 2270-2275, 2002. This work can be accessed fro...

ORGANISM(S): Drosophila melanogaster

2004-11-06 | E-FLYC-6 | biostudies-arrayexpress

Human milk and gastric peptidomics

It is unclear to what degree protein degradation occurs in the infant stomach and whether peptides previously annotated for bioactivity are released. This study combined nanospray liquid chromatography separation with time of flight mass spectrometry, comprehensive structural libraries and informati...

ORGANISM(S): Homo sapiens (Human)

2014-04-15 | PXD000688 | Pride