De Coninck Dieter D

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Transcriptomics (3)
Proteomics (1)

Organisms

Daphnia pulex (2)
Daphnia magna (1)
Gnathostoma spinigerum (1)
Ectocarpus siliculosus (1)
NEWT:6657 (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. 5579 (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. A130 (1)
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Pseudoalteromonas sp. D41 (1)
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Candidatus Protochlamydia amoebophila UWE25 (1)
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Acholeplasma laidlawii PG-8A (1)
Daphnia (1)
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Aspergillus flavus FRR 3643 (1)
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environmental samples (1)

Repository

biostudies-arrayexpress (3)
pride (1)

Tissue

Permanent cell line cell (1)
Cell culture (1)

Disease

Cervix carcinoma (1)

Technology Type

Mass Spectrometry (1)
Shotgun proteomics (1)

Publication Date

2015 (2)
2012 (1)
2010 (1)

Study type

Transcription profiling by array (3)

Release Date

2015 (1)
2012 (1)
2010 (1)

Lab affiliation

Laboratory of Pharmaceutical Biotechnology, Ghent University, B-9000 Ghent, Belgium (1)

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Effects of microcystis on Daphnia pulex

Although cyanobacteria produce a wide range of natural toxins that impact aquatic organisms, food webs and water quality, the mechanisms of toxicity are still insufficiently understood. Here, we implemented a whole-genome expression microarray to identify pathways, gene networks and paralogous gene ...

ORGANISM(S): Daphnia pulex

2012-07-26 | E-GEOD-36635 | biostudies-arrayexpress

Gene transcription profiles and potential transgenerational epigenetic effects related to Zn exposure history in Daphnia magna

A reduced level of DNA methylation has recently been described in both Zn-exposed and non-exposed offspring of Daphnia magna exposed to Zn. The hypothesis examined in this study is that DNA hypomethylation has an effect on gene transcription. A second hypothesis is that accumulative epigenetic effec...

ORGANISM(S): Daphnia magna

2010-07-23 | E-GEOD-22805 | biostudies-arrayexpress

Phospho-iTRAQ - Phospho-iTRAQ: Assessing Isobaric Labels for the Large-Scale Study Of Phosphopeptide Stoichiometry

One of the most extensively studied protein modifications is phosphorylation, a reversible posttranslational modification (PTM) with a central role in a broad range of cellular processes such as cell metabolism, homeostasis, transcription and apoptosis. Due to their transient character, phosphorylat...

ORGANISM(S): Homo sapiens (Human)

2015-01-30 | PXD001574 | Pride

Conserved transcriptional responses to cyanobacterial stressors are mediated by alternate regulation of paralogous genes in Daphnia

Despite a significant increase in genomic data, our knowledge of gene functions and their transcriptional responses to environmental stimuli remains limited. Here, we use the model keystone species Daphnia pulex to study environmental responses of genes in the context of their gene family history to...