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TranscriptomicsGene expression changes in Arabidopsis thaliana treated with Myzus persicae saliva
Reference: De Vos and Jander, 2009 - Plant, Cell, and Environment Aim: Identification of genes responding to aphid saliva. Background: During feeding on phloem sap aphids repeatedly salivate into the sieve element. It is thought that compounds in aphid saliva play a role in sustainable feeding. Th...
ORGANISM(S): Arabidopsis thaliana 
2009-11-11 | E-GEOD-18960 | biostudies-arrayexpress
ProteomicsDe novo heterozygous variants in POLR2A cause a neurodevelopmental syndrome with infantile-onset hypotonia
  ABSTRACT POLR2A encodes RPB1, the largest subunit of the RNA polymerase II (pol II) complex, which is responsible for transcription of all ~21,000 protein-encoding genes. Here we describe the first fifteen patients harboring de novo heterozygous variants in POLR2A. The majority presents with profo...
ORGANISM(S): Homo sapiens (Human) 
2019-09-02 | PXD011355 | Pride
Rpb1 De novo heterozygous variants Polr2a Rna polymerase ii 
TranscriptomicsComparative genomic hybridization of Streptococcus suis strains - part 1
Comparative genome hybridization was used to study genomic diversity among S. suis strains in more detail. All strains were hybridized to an oligo-array based on the genome of P1/7 with P1/7 as an internal reference in all experiments.
ORGANISM(S): Streptococcus suis 
2010-12-31 | E-MEXP-2531 | biostudies-arrayexpress
TranscriptomicsComparative genomic hybridization of Streptococcus suis strains - part 2
Comparative genome hybridization was used to study genomic diversity among S. suis strains in more detail. All strains were hybridized to an oligo-array based on the genome of P1/7 with P1/7 as an internal reference in all experiments.
ORGANISM(S): Escherichia coli 
2010-12-31 | E-MEXP-2533 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis during pathogen and insect attack
Plant defenses against pathogens and insects are regulated differentially by cross-communicating signaling pathways in which salicylic acid (SA), jasmonic acid (JA) and ethylene (ET) play key roles. To understand how plants integrate pathogen- and insect-induced signals into specific defense respons...
ORGANISM(S): Arabidopsis thaliana 
2008-06-13 | E-GEOD-5525 | biostudies-arrayexpress
TranscriptomicsAlarm pheromone habituation in Myzus persicae: Fitness consequences and the transcriptome of fear
In most aphid species, facultative parthenogenetic reproduction allows rapid growth and formation of large single-genotype colonies. Upon predator attack, individual aphids emit an alarm pheromone to warn the colony of this danger. (E)-beta-farnesene (EBF) is the predominant constituent of the alarm...
ORGANISM(S): Myzus persicae 
2010-02-28 | E-GEOD-20445 | biostudies-arrayexpress
UnknownDe Novo Heterozygous POLR2A Variants Cause a Neurodevelopmental Syndrome with Profound Infantile-Onset Hypotonia.
Not available
S-EPMC6699192 | biostudies-literature
ProteomicsMachine learning for grading and prognosis of esophageal dysplasia using mass spectrometry and histological imaging
Background: Barrett’s esophagus (BE) is a precursor lesion of esophageal adenocarcinoma and may progress from non-dysplastic through low-grade dysplasia (LGD) to high-grade dysplasia (HGD) and cancer. Grading BE is of crucial prognostic value and is currently based on the subjective evaluation of bi...
ORGANISM(S): Homo sapiens (Human) 
2021-11-15 | PXD028949 | Pride
Deep learning Mass spectrometry imaging H&e staining Barrett’s esophagus Machine learning 
UnknownPicosecond primary structural transition of the heme is retarded after nitric oxide binding to heme proteins.
Not available
S-EPMC2922218 | biostudies-literature
UnknownDirect observation of ligand transfer and bond formation in cytochrome c oxidase by using mid-infrared chirped-pulse upconversion.
Not available
S-EPMC2000433 | biostudies-literature
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