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TranscriptomicsHuman respiratory and stool specimens used to detect cardioviruses
Cardioviruses are a genus of picornaviruses that cause severe illnesses in rodents, but little is known about the prevalence, diversity, or spectrum of disease of such agents among humans. We report the identification of a group of human cardioviruses that have been detected and cloned directly fro...
ORGANISM(S): Viruses 
2008-09-17 | E-GEOD-11569 | biostudies-arrayexpress
TranscriptomicsIdentification of Xenotropic MuLV-related virus
This series includes 20 microarrays used to identify Xenotropic MuLV-related virus (XMRV) in a set of human prostate tumors associated with R462Q RNASEL variant (Urisman, et al. 2006). The series includes 19 prostate tumor samples (VP) and a cell line control (HeLa).
ORGANISM(S): Viruses 
2010-07-01 | E-GEOD-3607 | biostudies-arrayexpress
TranscriptomicsTetracyclines Specifically Target the Apicoplast of the Malaria Parasite Plasmodium falciparum
Tetracyclines are effective but slow-acting antimalarial drugs whose mechanism of action remains uncertain. To characterize the antimalarial mechanism of tetracyclines, we evaluated their stage-specific activities, impacts on parasite transcription, and effects on two predicted organelle targets, th...
ORGANISM(S): Plasmodium falciparum 
2010-07-01 | E-GEOD-5267 | biostudies-arrayexpress
TranscriptomicsNK cells and immune memory
Microarray profiling of adoptively transferred GFP-marked NK cells during MCMV infection in C57BL/6 mice Multiple independent replicates were collected per time point. NK cells were isolated from spleens of mice by flow cytometry. RNA isolated, amplified, and hybridized as two-color experiment aga...
ORGANISM(S): Mus musculus 
2011-02-11 | E-GEOD-25672 | biostudies-arrayexpress
TranscriptomicsInterferon signaling during early experimental malaria infection
Microarray profiling of whole blood of immunodeficient mouse strains at 24h after infection with Plasmodium chabaudi. Multiple independent replicates collected for each knockout. RNA isolated and amplified. Hybridized as two-color experiment against a common pooled reference.
ORGANISM(S): Mus musculus 
2012-11-19 | E-GEOD-23565 | biostudies-arrayexpress
TranscriptomicsExperimental Malaria Infection Triggers Early Expansion of Natural Killer Cells - NK cell response
In order to gain a better understanding of gene expression during early malaria infection, we conducted microarray analysis of early blood responses in mice infected with erythrocytic stage Plasmodium chabaudi. Immediately following infection, we observed coordinated and sequential waves of immune ...
ORGANISM(S): Mus musculus 
2010-05-19 | E-GEOD-12727 | biostudies-arrayexpress
TranscriptomicsExperimental Malaria Infection Triggers Early Expansion of Natural Killer Cells
In order to gain a better understanding of gene expression during early malaria infection, we conducted microarray analysis of early blood responses in mice infected with erythrocytic stage Plasmodium chabaudi. Immediately following infection, we observed coordinated and sequential waves of immune ...
ORGANISM(S): Mus musculus 
2010-05-19 | E-GEOD-12249 | biostudies-arrayexpress
ProteomicsS.cerevisiae - Whole organism, Intensity of gfp-tagged proteins, YEPD normalized data (Newman,nature,2006)
abundance based on YEPD normalized data, intensity of GFP-tagged proteins, Interaction consistency score: 8.2, Coverage: 38
ORGANISM(S): 4932 
2006-00-00 | 1367210792 | PAXDB
ProteomicsS.cerevisiae - Whole organism, Intensity of gfp-tagged proteins, SD normalized data (Newman,nature,2006)
abundance based on SD normalized data, intensity of GFP-tagged proteins, Interaction consistency score: 7.5, Coverage: 37
ORGANISM(S): 4932 
2006-00-00 | 3388877431 | PAXDB
ProteomicsThe B Cell Repertoire in Multiple Sclerosis Reveals Molecular Mimicry between EBNA1 and GlialCAM
This data set contains the mass spectrometry raw files for the paper The B Cell Repertoire in Multiple Sclerosis Reveals Molecular Mimicry between EBNA1 and GlialCAM. In multiple sclerosis (MS) intrathecal B lymphocytes are directly involved in inflammation and secrete oligoclonal immunoglobulin. Ho...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2021-02-11 | MSV000086842 | MassIVE
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