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TranscriptomicsTranscription profiling of Arabidopsis phloem
This sudy focuses on the identification of transcripts in the shoot phloem of the model plant Arabidopsis thaliana. Transcripts expressed in the phloem tissue (parenchyma cell, companion cell, sieve element) were excised by laser microdissection pressure catapulting (LMPC). These were compared with ...
ORGANISM(S): Arabidopsis thaliana 
2008-10-25 | E-GEOD-10247 | biostudies-arrayexpress
TranscriptomicsTranscription profiling by array of Arabidopsis after infection with different strains of Agrobacterium tumefaciens
This study focuses on responses of the host plant to infection with Agrobacterium tumefaciens. Genome wide changes in gene expression were integrated with the alterations in metabolite levels three hours after inoculation of agrobacteria. Plants were infected with the virulent strain C58, harboring ...
ORGANISM(S): Arabidopsis thaliana 
2009-12-02 | E-GEOD-13929 | biostudies-arrayexpress
TranscriptomicsGenome-wide analysis of the cytosine methylation profile in Arabidopsis thaliana crown galls
Integration of the bacterial T-DNA into the plant genome by virulent agrobacteria causes crown gall development on many plant species. Plant tumor development shares fundamental similarities with mammalian cancer progression despite obvious differences in initiation of tumor development. For neoplas...
ORGANISM(S): Arabidopsis thaliana 
2013-02-18 | E-GEOD-37680 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis thaliana six days after infection with Agrobacterium tumefaciens
This study focuses on responses of the host plant to infection and transformation with Agrobacterium tumefaciens. Genome wide changes in gene expression were integrated with the alterations in metabolite levels six days after inoculation of agrobacteria. Plants were infected with the virulent strain...
ORGANISM(S): Arabidopsis thaliana 
2009-12-02 | E-GEOD-13930 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis Agrobacterium tumefaciens induced tumour and non-tumour tissue
Agrobacterium tumefaciens, a bacterial species found in temperate soils world wide, is the causative agent of crown gall disease on many plants. A. tumefaciens-induced tumours are feared in orchards and vineyards because of their pathological interference with nutrient and water supply which results...
ORGANISM(S): Arabidopsis thaliana 
2022-11-21 | E-NASC-21 | biostudies-arrayexpress
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