Deep subsurface ecosystem

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Unknown (51)
Genomics (16)
Metabolomics (4)
Proteomics (1)

Organisms

Staphylococcus aureus subsp. aureus MN8 (1)
Dendrobaena veneta (1)
Orbicella faveolata (1)
Pseudodiploria strigosa (1)
Grouper iridovirus (1)
Aspergillus flavus (1)
Pseudodiploria clivosa (1)
Orbicella annularis (1)
Lentinula edodes (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (1)
Montastraea cavernosa (1)
Dichocoenia stokesii (1)
Serratia inhibens PRI-2C (1)
Lichtheimia corymbifera JMRC:FSU:9682 (1)
Pygoscelis adeliae (1)
Hirundo rustica (1)
Cannabis sativa (1)
Haematococcus (1)
Meandrina meandrites (1)
Diploria labyrinthiformis (1)
Colpophyllia natans (1)
Pristhesancus sp. 00004635 (1)
Glycine max x Glycine soja (1)
Chlamydomonas reinhardtii (1)
Conus striatus (1)
Neisseria gonorrhoeae (1)
Saccharum spontaneum (1)
Varroa destructor (1)
Xylocopa aruana (1)
Neisseria gonorrhoeae MS11 (1)

Organisms

hydrothermal vent metagenome (4)
subsurface metagenome (2)
mine drainage metagenome (2)
Marinobacter subterrani (1)
glacier lake metagenome (1)
rock metagenome (1)
aquatic metagenome (1)
sediment metagenome (1)
riverine metagenome (1)

Repository

ENA (16)
MetaboLights (4)
pride (1)

Technology Type

Mass spectrometry (3)
Mass spectrometry assay (1)
Mass Spectrometry (1)
Shotgun proteomics (1)

Instrument Platform

Liquid Chromatography MS - alternating - reverse phase (3)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2024 (3)
2022 (1)
2018 (1)

CHEBI ID

CHEBI:182831 (1)
CHEBI:35033 (1)
CHEBI:7071 (1)
CHEBI:27496 (1)

Metabolite Name

Fagopyritol B3 (1)
Cis-Ferulic acid [arabinosyl-(1|right|3)-[glucosyl-(1|right|6)]-glucosyl] ester (1)
Cellobiose; Polymaltose; D-Glucose, 4-O-beta-D-galactopyranosyl- (1)
Inosine; Ara-HX (1)
Cis-Zeatin-9-N-glucoside (1)
3''-(2''''-Galloylglucosyl)-phloroacetophenone (1)
(R)-1-O-[b-D-Glucopyranosyl-(1|right|6)-b-D-glucopyranoside]-1,3-octanediol (1)
2,3-Dihydroxy-1-(4-hydroxy-3-methoxyphenyl)-1-propanone (1)
3''-Glucosyl-2'',4'',6''-trihydroxyacetophenone (1)
Prenyl apiosyl-(1|right|6)-glucoside (1)
7,8-Dihydrovomifoliol 9-[apiosyl-(1|right|6)-glucoside] (1)
3''-O-Methyl-(-)-epicatechin-7-O-sulphate (1)
Eugenol O-[a-L-Arabinofuranosyl-(1|right|6)-b-D-glucopyranoside] (1)
(_)-3-(4-Hydroxyphenyl)-1,2-propanediol 4''-O-glucoside (1)
Trans-Resveratrol 4''-O-glucuronide (1)
D-Linalool 3-(6''''-malonylglucoside) (1)
2''''-Methoxy-(S)-oleuropein (1)
(2S,3R,4R)-3,4,4''-Trihydroxyflavan (1)
5''-Hydroxycotinine (1)
Maysin 3''-methyl ether (1)
1-Methoxy-3-(4-hydroxyphenyl)-2E-propenal 4''-glucoside (1)
D-Sedoheptulose 7-phosphate; Sedoheptulose 7-phosphate; Sedoheptulose 7-phosphate (1)
3-(3,4-Methylenedioxyphenyl)propenal (1)
Inosine 2''-phosphate (1)
Alpha-L-Rhamnopyranosyl-(1|right|3)-alpha-D-galactopyranosyl-(1|right|3)-L-fucose (1)
Sesaminol glucosyl-(1|right|2)-[glucosyl-(1|right|6)]-glucoside (1)
7-Methyl-1,4,5-naphthalenetriol 4-[xylosyl-(1|right|6)-glucoside] (1)
7,4''-Dihydroxyflavone (1)
(E)-Oxyresveratrol 3''-O-b-D-glucoside (1)
(_)-2''-Hydroxydihydrodaidzein (1)

First Public Date

2017 (3)
2016 (3)
2015 (3)
2023 (2)
2022 (2)
2024 (1)
2018 (1)
2014 (1)

Release Date

2022 (8)
2017 (8)
2019 (6)
2025 (4)
2024 (4)
2020 (4)
2021 (3)
2016 (3)
2023 (2)
2018 (2)
2015 (2)
2014 (2)
2026 (1)
2012 (1)
2004 (1)

Lab affiliation

Onstott Lab, Department of Geosciences, Princeton University (1)

Tags

xref:PubMed:23418786 (1)
xref:EuropePMC:PMC8612261 (1)
xref:EuropePMC:PMC5739006 (1)
xref:EuropePMC:PMC8399681 (1)
xref:EuropePMC:PMC9993121 (1)

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Deep Subsurface Basalts

Deep Subsurface Basalts Metagenome

PRJNA1062315 | ENA

Advances in Defining Ecosystem Functions of the Terrestrial Subsurface Biosphere.

Not available

S-EPMC9201636 | biostudies-literature

Deep Biosphere - Beatrix 326 BH2 (270712)

This project aims to investigate the metabolic pathways expressed by the active microbial community occurring at the deep continental subsurface. Subsurface chemoLithoautotrophic Microbial Ecosystems (SLiMEs) under oligotrophic conditions are supported by H2; however, the overall ecological trophic ...

ORGANISM(S): Sulfuritalea

2018-10-27 | PXD004634 | Pride