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ProteomicsDeep-sea in situ and laboratory proteomics provide insights into the sulfur metabolism characteristics of a novel deep-sea bacterium, Pseudodesulfovibrio serpens sp. nov.
Sulfate-reducing bacteria (SRB) are ubiquitously distributed across various biospheres and play key roles in global sulfur and carbon cycles. However, few deep-sea SRB have been cultivated and studied in situ, limiting our understanding of the true metabolism of SRB in the deep biosphere. Here, we f...
ORGANISM(S): environmental samples <bacteria 
2026-02-23 | PXD043318 | Pride
Sulfate-reducing bacteria  cultivation  deep sea  sulfur metabolism  in situ  proteomics  metatranscriptomics 
GenomicsMycoplasmatota bacterium strain:deep sea | isolate:deep sea
Mycoplasmatota bacterium strain:deep sea | isolate:deep sea Genome sequencing
PRJNA1015590 | ENA
ProteomicsA deep-sea bacterium senses and utilizes blue light via a BLUF-dependent pathway
Light was a ubiquitous environmental stimulus. Deep-sea microorganisms were exposed to a pervasive blue light optical environment. The utilization of blue light by deep-sea microorganisms, especially non-photosynthetic microorganisms, and the downstream pathway after light reception were obscure. Un...
ORGANISM(S): Spongiibacter sp. CSC3.9 
2022-01-18 | PXD028001 | Pride
Chemotaxis Deep-sea bacterium Bluf Light sensing Blue light 
GenomicsNocardioidaceae bacterium strain:deep sea | isolate:deep sea
Nocardioidaceae bacterium strain:deep sea | isolate:deep sea Genome sequencing
PRJNA733001 | ENA
GenomicsMycoplasmatota bacterium strain:deep sea | isolate:deep sea
Mycoplasmatota bacterium strain:deep sea | isolate:deep sea Genome sequencing
PRJNA728367 | ENA
GenomicsMycoplasmatota bacterium strain:deep sea | isolate:deep sea
Mycoplasmatota bacterium strain:deep sea | isolate:deep sea Genome sequencing
PRJNA728368 | ENA
GenomicsLentisphaerota bacterium strain:deep sea | isolate:deep sea
Lentisphaerota bacterium strain:deep sea | isolate:deep sea Genome sequencing
PRJNA704257 | ENA
GenomicsPlanctomycetota bacterium strain:deep sea | isolate:deep sea
Planctomycetota bacterium strain:deep sea | isolate:deep sea Genome sequencing
PRJNA685606 | ENA
ProteomicsResponses to different sulfur sources reveal the complicated and interlinked sulfur metabolism pathways of a deep-sea sulfate reducing bacterium
Sulfur metabolism in the deep-sea cold seep has been mentioned to have an important contribution to the biogeochemical cycle of sulfur in previous studies. And sulfate reducing bacteria have also been considered to be a dominant microbial population in the deep-sea cold seep and play a crucial role ...
ORGANISM(S): Desulfovibrio marinus 
2024-06-16 | PXD023247 | Pride
Sulfur Proteomics In situ Sulfate reducing bacterium Cold seep 
GenomicsLentisphaerae bacterium WC36 strain:deep sea | isolate:deep sea
Lentisphaerae bacterium WC36 strain:deep sea | isolate:deep sea Genome sequencing
PRJNA773653 | ENA
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