Dental calculus

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Unknown (214)
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Aerococcus urinae NBRC 15544 = CCUG 36881 (36)
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Organisms

human oral metagenome (10)
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oral metagenome (4)
Homo sapiens (3)
fossil metagenome (2)
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human metagenome (1)
metagenome (1)

Repository

ENA (83)
pride (36)
MassIVE (15)
geo (1)
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Tissue

Dental plaque (21)
Tooth (3)
Tooth enamel (3)
Bone (2)
Enamel (2)
Alveolar bone (1)
Dentary tooth (1)
Dentin (1)
Muscle (1)
Seed (1)
Tooth enamel organ (1)
Whole body (1)

Disease

Disease free (3)
Periodontitis (1)

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Mass Spectrometry (36)
Shotgun proteomics (29)
Bottom-up proteomics (4)
Data-dependent acquisition (2)
Gel-based experiment (1)
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Q Exactive (12)
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MaXis (1)
Orbitrap Exploris 480 (1)

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bacteria (1)

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Lab affiliation

BioArCh, University of York, UK (6)
Max Planck Institute for the Science of Human History (3)
Max Planck Institute for the Science of Human History Department of Archaeogenetics (3)
Max Planck Institute for the Science of Human Histoy, Department of Archaeology (3)
BioArCh, Department of Archaeology, University of York, United Kingdom (1)
Department of Anthropology, University of Oklahoma, USA (1)
Department of Archaeology, Max Planck Institute for the Science of Human History, Jena, Germany. (1)
Department of Life Sciences and Systems Biology University of Turin Italy (1)
Department of Medicine, Division of Canadian Centre for Rural and Agricultural Health, College of Medicine, University of Saskatchewan (1)
GLOBE Institute, University of Copenhagen (Denmark) (1)
Jesper Velgaard Olsen, PhD Vice Director, Professor Novo Nordisk Foundation Center for Protein Research Proteomics Program University of Copenhagen Faculty of Health and Medical Sciences (1)
Max Planck Institite for the Science of Human History, Department of Archaeogenetics (1)
Max Planck Institute for the Science of Human History, Ancient Protein Laboratory (1)
Max Planck Institute for the Science of Human History, Department of Archaeogenetics (1)
McGill University-Faculty of Dentistry 3640 University Street, Room M64, Montreal, QC Canada, H3A 0C7 (1)
Proteomics Core Facility and Research Group Proteomics, CEITEC-MU, Masaryk University, Brno, Czech Republic (1)
Research Center for Integrative Evolutionary Science, The Graduate University for Advanced Studies (SOKENDAI) (1)
School of Life Sciences, Jilin University, Changchun 130012, China (1)
School of Natural Sciences, Manchester Institute of Biotechnology, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, U.K. (1)
Section for Evolutionary Genomics, Globe Insitute, University of Copenhagen (1)
The GLOBE Institute, University of Copenhagen, Copenhagen, Denmark McDonald Institute for Archaeological Research, University of Cambridge, Cambridge, UK (1)
The Globe Institue, University of Copenhagen (1)
Weizmann Institute of Science Archeological Science (1)
Weizmann Institute of Science Archeological Science (1)
Weizmann Institute of Science, Archeological Science (1)

Publication date

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Proteomic Evidence of Dietary Sources in Ancient Dental Calculus

Archaeological dental calculus has emerged as a rich source of ancient biomolecules, including proteins. Previous analyses of proteins extracted from ancient dental calculus revealed the presence of the dietary milk protein β-lactoglobulin, providing direct evidence of dairy consumption in the archa...

ORGANISM(S): Homo sapiens (Human)

2018-07-18 | PXD009603 | Pride

Proteomic anlysis of dental calculus samples from Xiaohe

This analysis is a part of a larger study of the genomic origins of the Tarim Basin mummies. The dental calculus of seven individuals from Xiaohe contained ruminant dairy proteins, confirming milk consumption by the earliest inhabitants of Xiaohe.

ORGANISM(S): Homo sapiens (Human)

2021-09-09 | PXD027706 | Pride

Lc-ms Dental calculus

Direct evidence of milk consumption from ancient human dental calculus, UK

This study investigated the consumption of milk products in the archaeological record, utilizing human dental calculus as a reservoir of dietary proteins from archaeological samples from across Eurasia. Protein extraction and generation of tryptic peptides from dental calculus was performed using a ...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2016-10-04 | MSV000080221 | MassIVE

Direct evidence of milk consumption from ancient human dental calculus, St Helena

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2016-07-20 | MSV000079939 | MassIVE

Direct evidence of milk consumption from ancient human dental calculus, central Europe

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2017-03-29 | MSV000080765 | MassIVE

Direct evidence of milk consumption from ancient human dental calculus, northern southwest Asia

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2016-08-18 | MSV000080064 | MassIVE

Direct evidence of milk consumption from ancient human dental calculus, UK

ORGANISM(S): Homo sapiens (Human)

2015-02-26 | PXD001362 | Pride

Human Beta-lactoglobulin Dental calculus Dental plaque Lc-ms/ms

Multi-omic detection of Mycobacterium leprae in archaeological human dental calculus

Mineralised dental plaque (calculus) has proven to be an excellent source of ancient biomolecules. In this study we present a Mycobacterium leprae genome (6.6-fold), the causative agent of leprosy, recovered via shotgun sequencing of 16th century human dental calculus from an individual from Trondhe...

ORGANISM(S): Homo sapiens (Human)

2020-10-19 | PXD017836 | Pride

Dental calculus Palaeoproteomics

Direct evidence of milk consumption from ancient human dental calculus, St Helena

ORGANISM(S): Homo sapiens (Human)

2015-02-25 | PXD001357 | Pride

Human Beta-lactoglobulin Dental calculus Dental plaque Lc-ms/ms

Direct evidence of milk consumption from ancient human dental calculus, northern Europe

ORGANISM(S): Homo sapiens (Human)

2015-02-25 | PXD001361 | Pride

Human Beta-lactoglobulin Dental calculus Dental plaque Lc-ms/ms

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