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GenomicsGencord Data Access Committee
Data Access Committee EGAC00001000105
EGAC00001000105 | EGA
TranscriptomicsCoordinated effects of sequence variation on DNA binding, chromatin structure, and transcription.
Transcriptome sequencing (RNA-seq) experiment of 14 human lymphoblastoid cell line samples from the 1000 Genomes sample set (http://www.1000genomes.org/). Dataset includes two parent-daughter trios (CEU and YRI populations) and additional eight unrelated individuals (CEU population). This accession ...
ORGANISM(S): Homo sapiens 
2013-10-17 | E-MTAB-1883 | biostudies-arrayexpress
GenomicsCoordinated effects of sequence variation on DNA binding, chromatin structure, and transcription.
ChIP-seq experiment of 14 human lymphoblastoid cell line samples from the 1000 Genomes sample set (http://www.1000genomes.org/). Dataset includes two parent-daughter trios (CEU and YRI populations) and additional eight unrelated individuals (CEU population). This accession contains raw and mapped Ch...
ORGANISM(S): Homo sapiens 
2013-10-17 | E-MTAB-1884 | biostudies-arrayexpress
TranscriptomicsCoordinated effects of sequence variation on DNA binding, chromatin structure, and transcription.
Nascent transcriptome sequencing (GRO-seq) experiment of 3 human lymphoblastoid cell line samples from the 1000 Genomes sample set (http://www.1000genomes.org/). Dataset includes one parent-daughter trio (CEU populations). This accession contains raw, mapped, and processed GRO-seq read data, other a...
ORGANISM(S): Homo sapiens 
2013-10-17 | E-MTAB-1885 | biostudies-arrayexpress
GenomicsVariation and genetic control of chromatin architecture in humans (ChIPseq)
This data set comprises population (47 samples) measurements of transcription factor DNA binding (PU.1 and RPB2) and histone modification (H3K27ac, H3K4me1 and H3k4me3) levels for a subset of the 1000 Genomes Project CEPH samples. This data was generated as part of the following study: - Population ...
ORGANISM(S): Homo sapiens 
2019-03-14 | E-MTAB-3657 | biostudies-arrayexpress
TranscriptomicsVariation and genetic control of chromatin architecture in humans (RNAseq)
This data set comprises population (46 samples) measurements of RNA expression levels for a subset of the 1000 Genomes Project CEPH samples. This data was generated as part of the following study: - Population Variation and Genetic Control of Modular Chromatin Architecture in Humans. Cell. 2015 Aug ...
ORGANISM(S): Homo sapiens 
2016-05-27 | E-MTAB-3656 | biostudies-arrayexpress
Transcriptomicssmall RNA-sequencing of 452 lymphoblastoid cell lines from the 1000 Genomes
This RNA sequencing data set of 465 human lymphoblastoid cell line samples from the CEU, FIN, GBR, TSI and YRI populations from the 1000 Genomes sample collection was created by the Geuvadis consortium (www.geuvadis.org, http://www.geuvadis.org/web/geuvadis/our-rnaseq-project). The data is under emb...
ORGANISM(S): Homo sapiens 
2012-11-06 | E-GEUV-2 | biostudies-arrayexpress
TranscriptomicsRNA-sequencing of 465 lymphoblastoid cell lines from the 1000 Genomes
10.1038/nature12531
ORGANISM(S): Homo sapiens 
2012-11-06 | E-GEUV-1 | biostudies-arrayexpress
ProteomicsQuantitative variability of 342 plasma proteins in a human twin population
The human plasma proteome is clinically highly significant and has been studied extensively because it is thought that its molecular makeup provides a window into the health state of an individual. However, neither the quantitative variability of the plasma proteome nor the origins of the variation ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2016-07-20 | MSV000079937 | MassIVE
TranscriptomicsA new genome wide expression array and its application to eQTL mapping, synergy to other platforms
The study of gene expression as an intermediate phenotype in associating genotype to disease is growing rapidly. The success of this approach depends heavily on the availability of accurate, high throughput platforms for assaying expression levels of genome-wide gene sets. We evaluated a new platfor...
ORGANISM(S): Homo sapiens 
2012-04-29 | E-GEOD-15905 | biostudies-arrayexpress
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