Desai Anal A - OmicsDI

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Unknown (7)
Metabolomics (3)
Transcriptomics (1)
Proteomics (1)

Organisms

Danio rerio (1)
Alphavirus (1)
Betaherpesvirinae (1)
Brassica oleracea var. oleracea (1)
Cowpox virus (1)
Coxsackievirus (1)
Cytomegalovirus (1)
Dengue virus (1)
EFO:0001352 (1)
Filoviridae (1)
Hepatitis B virus (1)
Human alphaherpesvirus 1 (1)
Human betaherpesvirus 5 (1)
Human immunodeficiency virus 1 (1)
Human immunodeficiency virus 2 (1)
Influenza A virus (1)
Influenza C virus (1)
Japanese encephalitis virus (1)
Japanese encephalitis virus group (1)
Lyssavirus rabies (1)
Monkeypox virus (1)
Mus musculus (1)
Nostoc sp. PCC 7120 = FACHB-418 (1)
Oropouche virus (1)
Orthopoxvirus (1)
Orthopoxvirus vaccinia (1)
Rattus (1)
Ruditapes decussatus (1)
Tick-borne encephalitis virus (1)
Viruses (1)

Repository

MetaboLights (3)
biostudies-arrayexpress (1)
pride (1)

Tissue

Cell culture (1)

Technology Type

Mass spectrometry (3)
Mass Spectrometry (1)
Shotgun proteomics (1)

Instrument Platform

5975C Series GC/MSD (Agilent) (1)
Capillary electrophoresis MS - negative (1)
Capillary electrophoresis MS - positive (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - negative - hilic (1)

Publication Date

2013 (1)
2024 (1)
2023 (1)
2017 (1)
2021 (1)

CHEBI ID

CHEBI:15611 (3)
CHEBI:22660 (3)
CHEBI:16010 (3)
CHEBI:26271 (3)
CHEBI:30769 (3)
CHEBI:18237 (3)
CHEBI:15356 (2)
CHEBI:27266 (2)
CHEBI:17050 (2)
CHEBI:15428 (2)
CHEBI:16958 (2)
CHEBI:32816 (2)
CHEBI:78320 (2)
CHEBI:15978 (2)
CHEBI:16449 (2)
CHEBI:25017 (2)
CHEBI:24898 (2)
CHEBI:16865 (2)
CHEBI:27570 (2)
CHEBI:7916 (2)
CHEBI:26986 (2)
CHEBI:27897 (2)
CHEBI:18257 (2)
CHEBI:15741 (2)
CHEBI:25094 (2)
CHEBI:17822 (2)
CHEBI:18186 (2)
CHEBI:18012 (2)
CHEBI:28044 (2)
CHEBI:17234 (2)

Metabolite Name

Glucose (and isomers) (1)
Valeric/Isovaleric Acid (1)
Butyric/Isobutyric Acid (1)
No match: 1030.08 (1)
No match: 2824.20 (1)
No match: 1419.85 (1)
No match: 2955.81 (1)
No match: 2560.29 (1)
No match: 1725.47 (1)
No match: 2577.97 (1)
No match: 2058.53 (1)
No match: 2937.35 (1)
No match: 1155.19 (1)
No match: 2578.39 (1)
No match: 1909.62 (1)
No match: 1898.87 (1)
No match: 2510.90 (1)
No match: 2590.17 (1)
No match: 2629.75 (1)
No match: 1289.60 (1)
No match: 1308.63 (1)
No match: 1249.16 (1)
No match: 2520.76 (1)
No match: 1350.74 (1)
No match: 1054.48 (1)
No match: 1693.92 (1)
No match: 1888.53 (1)
No match: 2022.86 (1)
No match: 2028.75 (1)
No match: 1604.75 (1)

Study type

RNA-seq of coding RNA (1)

Release Date

2023 (2)
2016 (2)
2013 (1)
2024 (1)
2020 (1)
2018 (1)

Lab affiliation

Department of Biological Chemistry, David Geffen School of Medicine, UCLA, USA (1)

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A microfluidics-based in vitro model of the gastrointestinal human-microbe interface

Changes in the human gastrointestinal microbiome are associated with several diseases. To infer causality, experiments in representative models are essential, but widely used animal models exhibit limitations. Here we present a modular, microfluidics-based model (HuMiX, human–microbial crosstalk), w...

2017-07-28 | MTBLS328 | MetaboLights

Comparative characterization of the infant gut microbiome and their maternal lineage by a multi-omics approach

The human gut microbiome establishes and matures during infancy, and dysregulation at this stage may lead to pathologies later in life. We conducted a multi-omics study comprising three generations of family members to investigate the early development of the gut microbiota. Fecal samples from 20...

2024-03-07 | MTBLS7670 | MetaboLights

The Natural History After Ileal Pouch-Anal Anastomosis for Ulcerative Colitis: A Population-Based Cohort Study From the United States.

Not available

S-EPMC11534529 | biostudies-literature

A pathogen-specific isotope tracing approach reveals metabolic activities and fluxes of intracellular Salmonella

Pathogenic bacteria proliferating inside mammalian host cells need to rapidly adapt to the intracellular environment. How they achieve this and scavenge essential nutrients from the host has been an open question due to the difficulties in distinguishing between bacterial and host metabolites

2023-08-02 | MTBLS1275 | MetaboLights

The Comparative Effectiveness of Ciprofloxacin and Metronidazole for an Initial Episode of Pouchitis: A Propensity-Matched Study.

Not available

S-EPMC10841309 | biostudies-literature

A phase I dose-escalation study of the polyamine analog PG-11047 in patients with advanced solid tumors.

Not available

S-EPMC7337042 | biostudies-literature

Cost-effectiveness of pre-exposure prophylaxis for HIV prevention in men who have sex with men in the UK: a modelling study and health economic evaluation.

Not available

S-EPMC5988036 | biostudies-literature

Characteristics of women screened for a contraceptive intravaginal ring study in Kisumu, Kenya, 2014.

Not available

S-EPMC4946642 | biostudies-literature

Multiplexed CuAAC-Suzuki-Miyaura for tandem activity-based chemoproteomic profiling

Suzuki-Miyauara cross-coupling has been used for mass-spectrometry-based chemoproteomics, including for target deconvolution and site of labeling studies. We also demonstrated that Suzuki-Miyauara cross coupling and CuAAC can be combined for dual target labeling for mass spectrometry-based proteomic...

ORGANISM(S): Homo sapiens (Human)

2021-02-03 | PXD022279 | Pride

Evaluating Human Papillomavirus eHealth in Hmong Adolescents to Promote Vaccinations: Pilot Feasibility Study.

Not available

S-EPMC10337404 | biostudies-literature

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OmicsDI is part of the ELIXIR infrastructure

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