Desai J J - OmicsDI

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Unknown (2099)
Genomics (32)
Proteomics (22)
Transcriptomics (16)
Metabolomics (5)

Organisms

Caenorhabditis elegans (25)
Bombyx mori (20)
Schizosaccharomyces pombe (20)
Human immunodeficiency virus 1 (20)
Oryza sativa Indica Group (20)
Sinorhizobium meliloti BL225C (20)
Sus scrofa domesticus (20)
Ostreococcus tauri (20)
Saccharomyces cerevisiae (20)
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Rattus norvegicus (1)

Organisms

Rattus norvegicus (1)

Repository

biostudies-arrayexpress (39)
pride (20)
EGA (6)
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geo (1)
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Tissue

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Disease free (3)
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Sciatic nerve (1)
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Technology Type

Mass Spectrometry (20)
Shotgun proteomics (11)
Bottom-up proteomics (5)
Mass spectrometry (4)
Data-dependent acquisition (4)
Affinity purification coupled with mass spectrometry proteomics (2)
Codelink Human Whole Genome Bioarray (1)
Illumina MiSeq, ILLUMINA (1)
Glycoproteomics (1)

Instrument Platform

Illumina HiSeq 2000 (1)
Illumina HiSeq 4000 (1)
TSQ Quantis (1)
Capillary electrophoresis MS - positive (1)
Capillary electrophoresis MS - negative (1)
5975C Series GC/MSD (Agilent) (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)

Publication Date

2011 (25)
2021 (8)
2024 (6)
2023 (4)
2014 (3)
2009 (3)
2019 (3)
2012 (2)
2008 (2)
2026 (2)
2025 (2)
2016 (1)
2015 (1)
2013 (1)
2004 (1)
2022 (1)
2017 (1)
2020 (1)

UNIPROT ID/AC

LAMB3_MOUSE (2)
COLQ_MOUSE (2)
CFA53_MOUSE (2)
MMP9_MOUSE (2)
S6A14_MOUSE (2)
LOXL3_MOUSE (2)
CFA57_MOUSE (2)
SG3A2_MOUSE (2)
ABCA5_MOUSE (2)
CC151_MOUSE (2)
Q80UR4_MOUSE (2)
SPAT6_MOUSE (2)
S39A8_MOUSE (2)
MCPT8_MOUSE (2)
SP17_MOUSE (2)
VGFR1_MOUSE (2)
DLRB2_MOUSE (2)
LFNG_MOUSE (2)
PAR6B_MOUSE (2)
D3YVL2_MOUSE (2)
MIEAP_MOUSE (2)
GRAA_MOUSE (2)
CFA69_MOUSE (2)
C1QT2_MOUSE (2)
CLC1A_MOUSE (2)
M4A4D_MOUSE (2)
MUC1_MOUSE (2)
SPA6L_MOUSE (2)
CC181_MOUSE (2)
SEM3E_MOUSE (2)

CHEBI ID

CHEBI:18237 (3)
CHEBI:22660 (3)
CHEBI:15611 (3)
CHEBI:30769 (3)
CHEBI:26271 (3)
CHEBI:16010 (3)
CHEBI:17050 (2)
CHEBI:27570 (2)
CHEBI:18012 (2)
CHEBI:16865 (2)
CHEBI:30915 (2)
CHEBI:32816 (2)
CHEBI:15756 (2)
CHEBI:15978 (2)
CHEBI:44897 (2)
CHEBI:6650 (2)
CHEBI:17822 (2)
CHEBI:15428 (2)
CHEBI:15891 (2)
CHEBI:17234 (2)
CHEBI:15356 (2)
CHEBI:18257 (2)
CHEBI:25094 (2)
CHEBI:16958 (2)
CHEBI:15741 (2)
CHEBI:16449 (2)
CHEBI:26986 (2)
CHEBI:78320 (2)
CHEBI:27266 (2)
CHEBI:24898 (2)

Metabolite Name

Glucose (and isomers) (1)
Valeric/Isovaleric Acid (1)
Butyric/Isobutyric Acid (1)
Hesperetin sulfate (1)
Naringenin sulfate (1)
No match: 1030.08 (1)
No match: 2824.20 (1)
No match: 1419.85 (1)
No match: 2955.81 (1)
No match: 2560.29 (1)
No match: 1725.47 (1)
No match: 2577.97 (1)
No match: 2058.53 (1)
No match: 2937.35 (1)
No match: 1155.19 (1)
No match: 2578.39 (1)
No match: 1909.62 (1)
No match: 1898.87 (1)
No match: 2510.90 (1)
No match: 2590.17 (1)
No match: 2629.75 (1)
No match: 1289.60 (1)
No match: 1308.63 (1)
No match: 1249.16 (1)
No match: 2520.76 (1)
No match: 1350.74 (1)
No match: 1054.48 (1)
No match: 1693.92 (1)
No match: 1888.53 (1)
No match: 2022.86 (1)

First Public Date

2019 (1)
2014 (1)

Study type

ChIP-seq (24)
Transcription profiling by array (9)
ChIP-chip by tiling array (3)
RNA-seq of coding RNA (3)

Release Date

2022 (279)
2021 (254)
2023 (247)
2025 (223)
2024 (205)
2020 (189)
2019 (126)
2018 (103)
2016 (93)
2015 (81)
2017 (73)
2014 (60)
2011 (47)
2013 (41)
2026 (31)
2012 (21)
2009 (20)
2008 (15)
2010 (14)
2007 (7)
2006 (4)
2005 (3)
2002 (1)
2001 (1)

Lab affiliation

Biological Chemistry Department David Geffen School of Medicine UCLA (4)
Helmholtz Zentrum München, Institute of Lung Biology and Disease, Member of the German Center for Lung Research (DZL), Munich, Germany (1)
Department of Biological Chemistry, David Geffen School of Medicine, UCLA, USA (1)
Assistant Professor Department of Cellular and Molecular Medicine Florida International University | Herbert Wertheim College of Medicine (1)
Celleluar and Molecular Pharmacology, UCSF (1)
Bruce M. Spiegelman, Ph D. Stanley J. Korsmeyer Professor of Cell Biology and Medicine Dana-Farber Cancer Institute, Harvard Medical School bruce_spiegelman@dfci.harvard.edu 617-632-3567 (1)
Biological Chemistry Department David Greffen School of Medicine UCLA (1)
Program in Molecular Medicine, University of Massachusetts Chan Medical School, Worcester, MA 01605, USA (1)
Department of Psychiatry and Neurochemistry, Sahlgrenska Academy at the University of Gothenburg, SE-431 80 Mölndal, Sweden (1)
Walter and Eliza Hall Institute of Medical research (1)
Group Leader, Professor, Department of Zoology, University of Burdwan (1)
Director of Women’s Health Research Women’s Service Line Inova Health System (1)
Professor Biology, Dalhousie University (1)
Chemical Proteomics, Division of Chemistry I, MBB Dept., Biomedicum, Karolinska Insitute, Stockholm, Sweden (1)
Astrazeneca (1)
University (1)
North Carolina State University (1)

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Complete Genome Sequence of Cluster J Mycobacteriophage Superphikiman.

Not available

S-EPMC5794948 | biostudies-literature

Mutations in the cardiac L-type calcium channel associated with inherited J-wave syndromes and sudden cardiac death.

Not available

S-EPMC2999985 | biostudies-literature

Withdrawn: Precision Neoantigen Discovery Using Large-scale Immunopeptidomes and Composite Modeling of MHC Peptide Presentation.

Not available

S-EPMC8318994 | biostudies-literature

Comparison of microarray to RT-PCR

mRNA used for the analysis of these microarrays were previously analyzed for 34 genes by reverse transcription - polymerase chain reaction in Desai BJ et al., J.Orthop.Trauma 17: 689-698, 2003. These two data sets were subsequently studied to compare the results from these two different methods for ...

ORGANISM(S): Rattus norvegicus

2004-02-01 | GSE788 | GEO

Interaction of antithrombin with sulfated, low molecular weight lignins: opportunities for potent, selective modulation of antithrombin function.

Not available

S-EPMC2742855 | biostudies-literature

Bioinspired Polymeric High Aspect Ratio Particles with Asymmetric Janus Functionalities.

Not available

S-EPMC8115014 | biostudies-literature

Radon Exposure, IL-6 Promoter Variants, and Lung Squamous Cell Carcinoma in Former Uranium Miners.

Not available

S-EPMC4829998 | biostudies-literature

Microbial liberation of N-methylserotonin from orange fiber in gnotobiotic mice and humans

Plant fibers in byproduct streams produced by non-harsh food processing methods represent biorepositories of diverse, naturally occurring, and physiologically active biomolecules. To demonstrate one approach for their characterization, mass spectrometry of intestinal contents from gnotobiotic mice, ...

2022-07-28 | MTBLS2331 | MetaboLights

Phase II Pilot Study of Vemurafenib in Patients With Metastatic BRAF-Mutated Colorectal Cancer.

Not available

S-EPMC4669589 | biostudies-literature

The capsid-associated UL25 protein of the alphaherpesvirus pseudorabies virus is nonessential for cleavage and encapsidation of genomic DNA but is required for nuclear egress of capsids.

Not available

S-EPMC1488961 | biostudies-literature