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TranscriptomicsComparison of human induced pluripotent stem cell-derived intestinal tissue (xenografts) with normal adult human colon (NanoString GeoMX DSP)
Tissue samples from human induced pluripotent stem cell-derived intestinal tissue (iPSC-derived intestinal progenitors seeded onto collagen hydrogels) which were transplanted subcutaneously in mice. Mice were sacrificed and tissues were collected after 2, 3 or 4 weeks following engraftment. The tiss...
ORGANISM(S): Homo sapiens 
2025-02-05 | E-MTAB-13834 | biostudies-arrayexpress
ProteomicsiTRAQ-based Quantitative Phosphoproteomics Revealed Differences in Phosphorylation Modification Between Different Toxoplasma gondii Genotypes
iTRAQ technology combine with titanium dioxide (TiO2) affinity chromatography was applied to investigate the phosphoproteomic difference between type I (RH) strain, type II Prugniuad (PRU) strain and Chinese 1 (PYS) strain genotypic tachyzoites of T. gondii
ORGANISM(S): Toxoplasma gondii 
2019-11-14 | PXD007777 | Pride
Phosphoproteomics Tachyzoite Differentially expressed phosphoprotein (dpp) Toxoplasma gondii Genotype Itraq 
TranscriptomicsGenome-wide comparison of the transcriptomes of highly enriched normal and chronic myeloid leukemia stem and progenitor cell populations
The resistance of CML leukemic stem cells (LSC) to tyrosine kinase inhibitor therapies targeting BCR-ABL leads to persistence of disease in most cases. We have identified novel putative therapeutic targets that are differentially expressed in CML LSCs compared to normal hematopoietic stem cells (HS...
ORGANISM(S): Homo sapiens 
2013-05-08 | E-GEOD-43754 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of human Melanoma cell lines to investigate differences in wild-type p14ARF and mutant 14ARF
35 Melanoma cell lines hybridized to Affymetrix Hu133_Plus 2 microarrays were analysed for genes differentially expressed between cell lines carrying wild-type p14ARF and those with mutant 14ARF. All of these cell lines contained wild-type p53 (so that the effects of p14ARF mutations could be analys...
ORGANISM(S): Homo sapiens 
2008-06-15 | E-GEOD-7152 | biostudies-arrayexpress
TranscriptomicsRNA-Seq of persistent foot-and-mouth disease virus infection in the bovine nasopharynx
In our study, we examined tissue samples from 20 cattle that had been experimentally infected with the FMDV strain O/FRA/1/2001. In 18 of these animals, the infection persisted for more than 28 days. At necropsy, epithelial tissue was collected from the dorsal nasopharynx and dorsal soft palate, the...
ORGANISM(S): Bos taurus 
2025-07-01 | E-MTAB-14394 | biostudies-arrayexpress
TranscriptomicsProstate specific Pten deletion, Pten-Smad4 deletion, and Pten-p53 deletion
We used microarrays to detail the global gene expression and identified differentially expressed gene list between wild-type anterior prostates and Ptenpc-/- anterior prostates, Ptenpc-/-Smad4pc-/- and Ptenpc-/- anterior prostates, Ptenpc-/-p53pc-/- and Ptenpc-/- anterior prostates at 15 weeks of ag...
ORGANISM(S): Mus musculus 
2010-11-05 | E-GEOD-25140 | biostudies-arrayexpress
TranscriptomicsmiRNA expression data in idiopathic pulmonary fibrosis
Idiopathic pulmonary fibrosis (IPF) is an untreatable fibrotic lung disease characterized by fibroblast proliferation and epithelial mesenchymal transition. The expression and role of microRNAs (miRNA) has not been studied in IPF. Using miRNA expression microarrays we identified 46 differentially ex...
ORGANISM(S): Homo sapiens 
2010-04-23 | E-GEOD-13316 | biostudies-arrayexpress
TranscriptomicsNon-cancerous liver infiltrating lymphocytes of hepatitis C and tumor-infiltrating lymphocytes
Study goal is to disclose features of gene expressio profile of non-cancerous liver-infiltrating lymphocytes of type C hepatitis patients with hepatocellular carcinomas and tumor-infiltrating lymphocytes of type C hepatitis patients with hepatocellular carcinomas. Keywords: gene expression profile,...
ORGANISM(S): Homo sapiens 
2010-06-25 | E-GEOD-10461 | biostudies-arrayexpress
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