Ding Yang Y - OmicsDI

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Unknown (4527)
Proteomics (151)
Transcriptomics (37)
Genomics (14)
Metabolomics (13)

Organisms

Homo sapiens (74)
Bartonella quintana JK 31 (60)
Bombyx mori (60)
Mus musculus (34)
Bos taurus (4)
Drosophila melanogaster (4)
Rattus norvegicus (3)
Zea mays (2)
Caenorhabditis elegans (2)
Arabidopsis thaliana (2)
Rhodococcus opacus (1)
Mycobacterium tuberculosis (1)
Pseudomonas aeruginosa (1)
Danio rerio (1)
Staphylococcus aureus subsp. aureus RN4220 (1)
Cucurbita ficifolia (1)
Cryptococcus neoformans H99 (1)
Trichinella spiralis (1)
Cricetulus griseus (1)
Penaeus monodon nudivirus (1)
Manihot esculenta (1)
Vibrio parahaemolyticus RIMD 2210633 (1)
Macaca mulatta (1)
Macaca fascicularis fascicularis (1)
Brassica napus (1)
Mus sp. (1)
Oryctolagus cuniculus (1)
Mus (1)
Rattus rattus (1)
Escherichia coli (1)

Repository

iProX (90)
pride (60)
biostudies-arrayexpress (37)
EGA (14)
MetaboLights (13)
MassIVE (1)

Tissue

Cell culture (14)
Brain (8)
Liver (4)
Blood plasma (3)
Hepatocyte (3)
Lung (3)
Blood cell (3)
Blood (3)
CNS neuron (sensu Vertebrata) (2)
Urine (2)
Plant cell (2)
Permanent cell line cell (2)
Uterine endometrial cancer cell (1)
Pancreatic islet cell (1)
Endosperm (1)
Follicular fluid (1)
Seedling (1)
Embryonic stem cell (1)
Shoot (1)
Lymph node (1)
Early embryonic cell (1)
HeLa cell (1)
Whole body (1)
Leaf (1)
Epithelial cell (1)
Kidney (1)
Monocyte (1)

Disease

Acute leukemia (3)
Autism spectrum disorder (2)
Type 2 diabetes mellitus (2)
Endometrial Endometrioid Adenocarcinoma (1)
Septicemia (1)
Hepatocellular carcinoma (1)
Severe acute respiratory syndrome (1)
Prostate adenocarcinoma (1)
Cervix carcinoma (1)
Wounds and Injuries (1)
Disease free (1)
Colon cancer (1)

Technology Type

Mass Spectrometry (60)
Shotgun proteomics (31)
Bottom-up proteomics (12)
Mass spectrometry (11)
Data-dependent acquisition (6)
Top-down proteomics (6)
Gel-based experiment (3)
Mass spectrometry assay (2)
RNA mass spectrometry (2)
Immunopeptidomics (2)
Affinity purification coupled with mass spectrometry proteomics (2)
Illumina Genome Analyzer, Illumina HiSeq 2000, Illumina MiSeq, Affymetrix_U133plus2- (1)
Illumina HiSeq 2000 (1)
All-ion fragmentation (1)
DiaPASEF (1)
SWATH MS (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (7)
Liquid Chromatography MS - negative - reverse phase (6)
Liquid Chromatography MS - positive - reverse-phase (2)
Liquid Chromatography MS - negative - reverse-phase (2)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - positive - hilic (2)
HiSeq X Ten (1)
NextSeq 500 (1)
Q Exactive (1)
Liquid Chromatography MS - negative – rp (1)
Liquid Chromatography MS - positive – rp (1)
Liquid Chromatography MS - alternating - reverse phase (1)

Publication Date

2022 (30)
2026 (22)
2025 (17)
2024 (15)
2023 (14)
2021 (11)
2010 (8)
2020 (8)
2014 (7)
2013 (6)
2012 (5)
2019 (5)
2015 (4)
2017 (3)
2018 (3)
2011 (2)
2016 (1)
2009 (1)
2008 (1)

CHEBI ID

CHEBI:7916 (6)
CHEBI:18183 (6)
CHEBI:17351 (6)
CHEBI:15741 (5)
CHEBI:17154 (5)
CHEBI:16196 (5)
CHEBI:17750 (5)
CHEBI:18050 (5)
CHEBI:55328 (5)
CHEBI:15971 (5)
CHEBI:16704 (5)
CHEBI:16015 (5)
CHEBI:16919 (5)
CHEBI:16828 (5)
CHEBI:18344 (5)
CHEBI:17687 (5)
CHEBI:30805 (4)
CHEBI:16450 (4)
CHEBI:16755 (4)
CHEBI:36313 (4)
CHEBI:16040 (4)
CHEBI:15698 (4)
CHEBI:16708 (4)
CHEBI:28875 (4)
CHEBI:16610 (4)
CHEBI:17821 (4)
CHEBI:37024 (4)
CHEBI:16566 (4)
CHEBI:17196 (4)
CHEBI:17568 (4)

Metabolite Name

Hypoxanthine (5)
Uracil (4)
Kynurenic acid (4)
Daidzein (4)
Adenosine (4)
Oleic acid (4)
Adenine (4)
Guanosine (4)
Creatinine (4)
Pyrrole-2-carboxylic acid (3)
Leucine (3)
Indoleacetic acid (3)
Phthalic acid (3)
Valine (3)
Thymine (3)
Myristoleic acid (3)
Pantothenate (3)
4-Pyridoxic acid (3)
Pantothenic acid (3)
L-Histidine (3)
4-Hydroxybenzaldehyde (3)
Cholic acid (3)
Glycocholic acid (3)
Arachidonic acid (3)
Citric acid (3)
Dibutyl phthalate (3)
Malic acid (3)
Proline (3)
Palmitic acid (3)
Linoleic acid (3)

Study type

Transcription profiling by array (25)
RNA-seq of coding RNA (7)
RNA-seq of non coding RNA (2)
Unknown experiment type (1)
ChIP-chip by tiling array (1)
Other (1)

Release Date

2025 (774)
2022 (627)
2024 (571)
2023 (555)
2021 (487)
2020 (332)
2018 (215)
2019 (199)
2017 (170)
2016 (132)
2026 (121)
2015 (120)
2014 (91)
2013 (43)
2012 (41)
2010 (25)
2011 (20)
2008 (15)
2009 (11)
2007 (5)
2006 (4)
2003 (3)
2005 (1)
2002 (1)
2001 (1)

Lab affiliation

Institute of Genetics & Developmental Biology, Chinese Academy of Sciences (2)
Institute of Translational Medicine, Zhejiang University School of Medicine, Zhejiang University (2)
Lab of Jie Zheng, Neuroscience Research Institute and Department of Neurobiology, School of Basic Medical Sciences, Peking University, Beijing 100083, P.R. China (2)
1Department of Hematology, Tongji Hospital, Frontier Science Center for Stem Cell Research, Shanghai Key Laboratory of Signaling and Disease Research, School of Life Sciences and Technology, Tongji University, Shanghai, 200092, China (2)
Guangdong Pharmaceutical University (2)
Department of Hematology, Tongji Hospital, Frontier Science Center for Stem Cell Research, Shanghai Key Laboratory of Signaling and Disease Research, School of Life Sciences and Technology, Tongji University, Shanghai, 200092, China (2)
Hubei University of Medicine, Taihe Hospital (2)
Tongji University (2)
Key Laboratory of Protein and Peptide Pharmaceuticals & Laboratory of Proteomics, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China (2)
Department of Gynecological Oncology, Tongji Hospital, Tongji Medical College,Huazhong University of Science and Technology (1)
Institute of Bioengineering, College of Chemical and Biological Engineering, Zhejiang University, Hangzhou, Zhejiang 310027, China (1)
Institute of Crop Sciences, Chinese Academy of Agricultural Sciences (CAAS)/National Key Facility for Crop Gene Resources and Genetic Improvement, Beijing, China (1)
Doctor at Tongji Hospital, Huazhong University of Science and Technology, Wuhan, China (1)
Key Laboratory of the Ministry of Education for Medicinal Resources and Natural Pharmaceutical Chemistry, National Engineering Laboratory for Resource Development of Endangered Crude Drugs in Northwest of China, College of Life Sciences,Shaanxi Normal University,Xi'an,Shaanxi,China (1)
The First Affiliated Hospital of Jinan University (1)
State Key Laboratory of Coordination Chemistry, School of Chemistry and Chemical Engineering, Chemistry and Biomedicine Innovation Center (ChemBIC), Nanjing University, Nanjing, China (1)
Departments of Chemistry and Biochemistry, Purdue Center of Cancer Research, Purdue University (1)
College of Veterinary Medicine, China Agricultural University, Beijing 100193, China (1)
Children's Hospital of Soochow University, Suzhou (1)
Smilow Center for Translational Research 12-124 3400 Civic Center Blvd Philadelphia, PA 19104 P: 215-573-5413 F: 215-898-5408 (1)
yangjinguang@caas.cn (1)
Department of Biotherapy, State Key Laboratory of Biotherapy and Cancer Center, West China Hospital, and West China School of Basic Medical Sciences & Forensic Medicine, Sichuan University, and Collaborative Innovation Center for Biotherapy, Chengdu 610041, P.R. China (1)
Shanghai Key Laboratory of Regulatory Biology, School of Life Sciences, East China Normal University, Shanghai 200241, China. (1)
College of Agronomy, Nanjing Agricultural University (1)
College of Life and Health Sciences, Northeastern University, Shenyang, China. (1)
Institute of Pharmaceutical Science, School of Cancer and Pharmaceutical Science,United Kingdom (1)
Key Laboratory of Medicinal Plant Biology of Yunnan Province, Yunnan Agricultural University, Kunming 650201, China (1)
Center for Kidney Disease, 2nd Affiliated Hospital, Nanjing Medical University, Nanjing, Jiangsu 210003, China (1)
Shanghai Institute of Rheumatology, Renji Hospital, Shanghai Jiao Tong University School of Medicine (SJTUSM) (1)
Department of Epidemiology, College of Public Health, Zhengzhou University (1)

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Establishment of a Simple and Rapid Nucleic Acid Detection Method for Hookworm Identification.

Not available

S-EPMC10142964 | biostudies-literature

Structural and functional investigation of DinG containing a 3'-5' exonuclease domain.

Not available

S-EPMC12345164 | biostudies-literature

Expression data from BAP1 depleted cells

The deubiquitinase BAP1 is a candidate tumor suppressor regulating cell proliferation in human and is required for development in Drosophila. BAP1 is assembled into high molecular weight transcriptional multi-protein complexes. In order to identify potential BAP1 target genes, global mRNA expression...

ORGANISM(S): Homo sapiens

2010-11-05 | E-GEOD-23035 | biostudies-arrayexpress

The complete mitochondrial genome of <i>Bibio hordeiphagus</i> Yang & Luo (Diptera: Bibionidae).

Not available

S-EPMC12517408 | biostudies-literature

Expression data from testes of CG3875 knockout and wildtype flies

CG3875 is a young duplicate gene of kep1 family originated recently in Drosophila melanogaster (D. melanogaster) species complex (including D. melanogaster, D. simulans, D. mauritiana and D. sechellia) after it split from D. yakuba. It encodes an RNA-binding protein containing a single maxi-KH domai...

ORGANISM(S): Drosophila melanogaster

2010-12-31 | E-GEOD-22289 | biostudies-arrayexpress

Integrating strategies of metabolomics, network pharmacology, and experiment validation to investigate the processing mechanism of Epimedium fried with suet oil to warm kidney and enhance yang.

Not available

S-EPMC9905240 | biostudies-literature

Molecular Characterization of Rifampicin-Resistant Staphylococcus aureus Isolates from Retail Foods in China.

Not available

S-EPMC8698944 | biostudies-literature

Differences in small noncoding RNAs profile between bull X and Y sperm.

Not available

S-EPMC7505075 | biostudies-literature

Exploring synergistic effects of Achyranthes bidentata Blume and Paeonia lactiflora Pall. on hypertension with liver yang hyperactivity using the multidisciplinary integrative strategy.