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Transcriptomicsgenes regulated by ros and dme-Genetic dissection of endosperm development
rs10-02_ros_dme - genes regulated by ros and dme - Genes regulated by ros/dme? - Seeds of Col x ROS-/-/DME+/- 3 and 6 days after pollination (DAP) were harvested. Seeds of the cross Col x Col (3 and 6 DAP) were used as a control. 4 dye-swap - gene knock out
ORGANISM(S): Arabidopsis thaliana 
2011-06-01 | E-GEOD-29626 | biostudies-arrayexpress
TranscriptomicsExpression profiling of dme-miR-310 cluster (miR-310, miR-311, miR-312, miR-313) knockout
Expression profiling of the dme-miR-310 cluster knockout line in D.melanogaster. The knockout line was generated in an imprecise P-element excision screen using a stock P{EP}2587 containing a P-element insertion directly upstream of the miR-310 cluster. The precise excision line of P{EP}2587 was use...
ORGANISM(S): Drosophila melanogaster 
2010-06-24 | E-GEOD-15851 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis pollen and stamen with induced DEMETER expression to identify
We used Affymetrix Arabidopsis ATH1 GeneChip to profile RNAs active in wild type columbia (glabrous) and CaMV::DME pollen and stamens. Experiment Overall Design: DME is not active in wild type pollen and stamen. DME was induced in pollen and stamen by a cauliflower mosaic virus promoter (CaMV). RN...
ORGANISM(S): Arabidopsis thaliana 
2008-06-16 | E-GEOD-9408 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of human MCF10A mammary gland epithelial cells stimulated with epidermal growth factor vs unstimulated and sampled at multiple time points to investidage the temporal regulation of the cellular EGFR cascade
MCF10A cells derived from spontaneously immortalized normal human mammary epithelia were subjected to EGF/SERUM stimulation for 0,20,40,60,120,240 and 480 minutes. We used microarrays to understand the temporal regulation of the cellular EGFR cascade. Experiment Overall Design: MCF10A cells were gro...
ORGANISM(S): Homo sapiens 
2007-11-01 | E-GEOD-6784 | biostudies-arrayexpress
TranscriptomicsGlobal DNA methylation landscape reveals roles of DNA methylation involved in the regulation of drug metabolizing enzyme [II]
In order to elucidate the role of DNA methylation in the DME gene regulation, global DNA methylation and mRNA expression profiles of human tissues and cell lines were examinde by HumanMethylation450 Bead Chip and SurePrint G3 Human Gene Expression 8×60K v2. We demonstrated DNA methylation landscape ...
ORGANISM(S): Homo sapiens 
2015-06-16 | E-GEOD-67477 | biostudies-arrayexpress
TranscriptomicsGlobal DNA methylation landscape reveals roles of DNA methylation involved in the regulation of drug metabolizing enzyme [III]
In order to elucidate the role of DNA methylation in the DME gene regulation, global DNA methylation and mRNA expression profiles of human tissues and cell lines were examinde by HumanMethylation450 Bead Chip and SurePrint G3 Human Gene Expression 8×60K v2. We demonstrated DNA methylation landscape ...
ORGANISM(S): Homo sapiens 
2015-06-16 | E-GEOD-67484 | biostudies-arrayexpress
TranscriptomicsMetabolic imbalance caused by loss of malic enzymes in the legume endosymbiont Sinorhizobium meliloti
Malic enzymes decarboxylate the tricarboxylic acid (TCA) cycle intermediate malate to the glycolytic end-product pyruvate and are well positioned to regulate metabolic flux in central carbon metabolism. The bacterium Sinorhizobium meliloti has a NAD(P)-malic enzyme (DME) and a NADP-malic enzyme (TM...
ORGANISM(S): Sinorhizobium meliloti 
2015-07-25 | E-GEOD-71308 | biostudies-arrayexpress
TranscriptomicsGlobal DNA methylation landscape reveals roles of DNA methylation involved in the regulation of drug metabolizing enzyme [I]
In order to elucidate the role of DNA methylation in the DME gene regulation, global DNA methylation and mRNA expression profiles of human tissues and cell lines were examinde by HumanMethylation450 Bead Chip and SurePrint G3 Human Gene Expression 8×60K v2. We demonstrated DNA methylation landscape ...
ORGANISM(S): Homo sapiens 
2015-06-16 | E-GEOD-67318 | biostudies-arrayexpress
TranscriptomicsExpression data from adult male Drosophila heads
A Drosophila microRNA (dme-miR-14) is involved in regulating the levels of insulin-like peptides (ilps) from the neuronal insulin-producing cells (IPCs). This is crucial for regulation of fat content in adult flies. Finding the target of this microRNA is crucial for understanding the regulation of i...
ORGANISM(S): Drosophila melanogaster 
2011-02-01 | E-GEOD-20202 | biostudies-arrayexpress
TranscriptomicsExpression data from third instar larval eye discs
Expression of dE2F1 induces proliferation and apoptosis. We sought to perform an unbiased analysis of the effect of co-expression of miR-11 We used microarrays to identify differentially regulated genes following expression of dE2F1 and/or dme-miR-11 using the GMR-Gal4 driver Drosophila third instar...
ORGANISM(S): Drosophila melanogaster 
2011-08-31 | E-GEOD-25267 | biostudies-arrayexpress
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