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TranscriptomicsIdentification of KIL1 targets via RNA-Seq in Zea mays
To understand how the NAC transcription factor KIL1 regulates age-induced senescence and cell death in maize silks, we need to get a genome-wide view on its downstream targets. We propose to compare the transcriptome profiles of GOF and LOF transgenic silk tissue with the profile of wild-type B104 s...
ORGANISM(S): Zea mays 
2022-08-16 | E-MTAB-10850 | biostudies-arrayexpress
TranscriptomicsTranscript profile analyses of maize silk strands during silk senescence
To fully characterize the extent of genomic changes in senescent silk, we performed a time-course tissue harvesting. Material was collected at four time points: 3-, 7-, 11- and 15 days after silk emergence (DASE). Maize inbred line B104; 2 cm of basal part of silk from rings 6-10
ORGANISM(S): Zea mays 
2022-08-16 | E-MTAB-10847 | biostudies-arrayexpress
ProteomicsThe Proteome Landscape of the Kingdoms of Life
Proteins preform the vast majority of functions in all biological domains but their large-scale investigation has lagged behind for technological reasons. Since the first essentially complete eukaryotic proteome was reported1, advances in mass spectrometry (MS)-based proteomics2 have enabled increas...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2020-07-13 | MSV000085728 | MassIVE
ProteomicsThe Proteome Landscape of the Kingdoms of Life
Proteins preform the vast majority of functions in all biological domains but their large-scale investigation has lagged behind for technological reasons. Since the first essentially complete eukaryotic proteome was reported1, advances in mass spectrometry (MS)-based proteomics2 have enabled increas...
ORGANISM(S): Dictyostelium Discoideum (ncbitaxon:44689) Triticum Aestivum (ncbitaxon:4565) Escherichia Coli (ncbitaxon:562) Sus Scrofa Domesticus (ncbitaxon:9825) Gallus Gallus (ncbitaxon:9031) Rattus Norvegicus (ncbitaxon:10116) Homo Sapiens (ncbitaxon:9606) Danio Rerio (ncbitaxon:7955) Saccharomyces Cerevisiae (ncbitaxon:4932) Bos Taurus (ncbitaxon:9913) Drosophila Melanogaster (ncbitaxon:7227) Arabidopsis Thaliana (ncbitaxon:3702) Vitis Vinifera (ncbitaxon:29760) Mus Musculus (ncbitaxon:10090) Caenorhabditis Elegans (ncbitaxon:6239) 
2020-07-10 | MSV000085716 | MassIVE
ProteomicsA non-canonical vitamin K cycle is a potent ferroptosis suppressor
Raw files corresponding to LC-MS-based relative quantification of oxidized lipids in Pfa1 cells and mouse liver samples subjected to ferroptosis. Data were acquired in parallel reaction monitoring (PRM) MS/MS mode.
ORGANISM(S): Mus Musculus (ncbitaxon:10090) 
2022-05-19 | MSV000089489 | MassIVE
UnknownThe associations of major foods and fibre with risks of ischaemic and haemorrhagic stroke: a prospective study of 418 329 participants in the EPIC cohort across nine European countries.
Not available
S-EPMC7377582 | biostudies-literature
ProteomicsT.litoralis DSM 5473 - Whole organism, SC (Muelleretal,nature2020)
abundance based on Spectral counting, Interaction consistency score: 3.1, Coverage: 12
ORGANISM(S): 523849 
2020-00-00 | 3126980404 | PAXDB
ProteomicsA.muciniphila ATCC BAA-835 - Whole organism, SC (Muelleretal,nature2020)
abundance based on Spectral counting, Interaction consistency score: 9.0, Coverage: 65
ORGANISM(S): 349741 
2020-00-00 | 1999420917 | PAXDB
ProteomicsP.distasonis ATCC 8503 - Whole organism, SC (Muelleretal,nature2020)
abundance based on Spectral counting, Interaction consistency score: 12.9, Coverage: 52
ORGANISM(S): 435591 
2020-00-00 | 469174560 | PAXDB
ProteomicsC.comes - Whole organism, SC (Muelleretal,nature2020)
abundance based on Spectral counting, Interaction consistency score: 8.8, Coverage: 42
ORGANISM(S): 410072 
2020-00-00 | 1122861391 | PAXDB
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