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TranscriptomicsAnalysis of the melon (Cucumis melo) small RNAome by high-throughput pyrosequencing
Melon (Cucumis melo L.) is a commercially important fruit crop that is cultivated worldwide. The melon research community has recently benefited from the determination of a complete draft genome sequence and the development of associated genomic tools, which have allowed us to focus on small RNAs (s...
ORGANISM(S): Cucumis melo 
2011-08-03 | E-GEOD-28653 | biostudies-arrayexpress
TranscriptomicsHigh-throughput pyrosequencing of endogenous small RNAs in O. Europaea
Small RNAs of 20 to 25 nucleotides in length maintain genome integrity and control gene expression in a multitude of developmental and physiological processes. Despite RNA silencing has been primarily studied in model plants, the advent of high-throughput sequencing technologies has enabled profilin...
ORGANISM(S): Olea europaea 
2011-03-31 | E-GEOD-27093 | biostudies-arrayexpress
TranscriptomicsHigh-throughput pyrosequencing of plant virus small RNAs
Plant virus infection involves the production of viral small RNAs (vsRNAs) with the potential to associate with distinct Argonaute (AGO)-containing silencing complexes and mediate diverse silencing effects on RNA and chromatin. We used multiplexed, high-throughput pyrosequencing to profile populatio...
ORGANISM(S): Melon necrotic spot virus 
2009-07-09 | E-GEOD-16996 | biostudies-arrayexpress
TranscriptomicsExpression data from rice leaves treated or not with fungal elicitors and high-throughput pyrosequencing of endogenous small RNAs from Oryza sativa
High-throughput sequencing of small RNAs from rice was used to identify distinct miRNAs that are responsive to elicitors from the fungal pathogen Magnaporthe oryzae. [Expression profiling by array] We used microarrays to determine the expression behaviour of target genes for elicitor-regulated miRN...
ORGANISM(S): Oryza sativa Japonica Group 
2014-01-15 | E-GEOD-30583 | biostudies-arrayexpress
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