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UnknownAn Integrated Pipeline for Annotation and Visualization of Metagenomic Contigs.
Not available
S-EPMC6803454 | biostudies-literature
TranscriptomicsDigital gene expression profiling of the Phytophthora sojae transcriptome
This experiment contains Phytophthora sojae samples and RNA-seq data from experiment E-GEOD-29561 (https://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-29651/) to understand gene expression during the P. sojae life cycle. The transcriptome of the oomycete plant pathogen Phytophthora sojae was profi...
ORGANISM(S): Phytophthora sojae 
2011-09-01 | E-MTAB-4039 | biostudies-arrayexpress
TranscriptomicsDigital gene expression profiling of the Phytophthora sojae transcriptome
The transcriptome of the oomycete plant pathogen Phytophthora sojae was profiled at 10 different developmental and infection stages based on a 3'-tag digital gene expression (DGE) protocol. More than 90 million clean sequence tags were generated and compared to the P. sojae genome and its 19,027 pre...
ORGANISM(S): Glycine max 
2011-09-01 | E-GEOD-29651 | biostudies-arrayexpress
ProteomicsTengdan Capsule Prevents Hypertensive Kidney Damage in SHR by Inhibiting Periostin-mediated Renal Fibrosis
In order to reveal the potential molecular mechanism of TDC in renal protection of rats with essential hypertension, TMT-based quantitative proteomics analysis method was used to conduct quantitative analysis of proteins extracted from kidney of SHR of model and TDC treatment groups after 4 weeks of...
ORGANISM(S): Rattus norvegicus (Rat) 
2021-09-10 | PXD024102 | Pride
Teng dan capsule  hypertension-induced kidney damage  periostin  tgfβ/smad signaling pathway  inflammatory response  human kidney hek293 cells 
ProteomicsLD4172 100nM and LD4172NC 100nM treated MDA_MB_231 cell line global proteomics
1 million MDAMB231 cells were seeded in 6-well plates. On the following day, MBAMB231 cells were treated in triplicates with DMSO, LD4172 (100 nM) or LD4172-NC (100 nM) for 6 hours. Cells were washed with ice-cold PBS three times. The cell pellets were lysed, reduced, alkylated, and digested by Easy...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2023-07-07 | MSV000092377 | MassIVE
ProteomicsLD4172 and LD4172NC treated MDA_MB_231 cell line global proteomics
1 million MDAMB231 cells were seeded in 6-well plates. On the following day, MBAMB231 cells were treated in triplicates with DMSO, LD4172 (100 nM) or LD4172-NC (100 nM) for 6 hours. Cells were washed with ice-cold PBS three times. The cell pellets were lysed, reduced, alkylated, and digested by Easy...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2023-07-05 | MSV000092348 | MassIVE
Proteomicsproteomic analysis of deletion mutants in Cronobacter sakazakii BAA-894
Proteomic analysis of gene deletion mutants in Cronobacter sakazakii BAA-894
ORGANISM(S): Cronobacter Sakazakii Atcc Baa-894 
2023-03-07 | PXD040672 |
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